Author:
Rawlings Christopher John,Davey Robert P.
Abstract
AbstractThis paper describes progress towards an integrated data framework that supports the sharing of data from the Designing Future Wheat (DFW) strategic research programme funded by the UK BBSRC. DFW is a 5 year project (https://designingfuturewheat.org.uk/) that spans eight research institutes and universities, and aims to deliver pre-breeding germplasm to breeders to improve and increase the genetic diversity of their breeding programs. DFW is committed to making its data open to the wider research community by adopting FAIR data sharing approaches. It is also a good example of a data-intensive strategic research programme which follows a cyclical Field-to-Lab-to-Field approach that is representative of much contemporary and multidisciplinary crop science research. However, even with dedicated funding to develop crop data research infrastructures within DFW, we found that there are many challenges that require pragmatic and flexible ways to enable them to interoperate. We present key DFW data resources as a case study to assess progress and discuss these challenges with a view to developing infrastructure that exposes metadata-rich datasets and that meets FAIR principles.
Publisher
Springer International Publishing
Reference21 articles.
1. Berti-Equille, L. (2001). Integration of biological data and quality-driven source negotiation. In Conceptual modeling—ER 2001 (pp. 256–269). Springer.
2. Börnigen, D., Moon, Y. S., Rahnavard, G., et al. (2015). A reproducible approach to high-throughput biological data acquisition and integration. PeerJ, 3, e791.
3. Borrill, P., Harrington, S. A., Simmonds, J., & Uauy, C. (2019). Identification of transcription factors regulating senescence in wheat through gene regulatory network modelling. Plant Physiology, 180, 1740–1755.
4. Earlham Institute (2018) National Capability in e-Infrastructure. https://www.earlham.ac.uk/national-capability-e-infrastructure. Accessed 23 Feb 2021
5. Food and Agriculture Organization of the United Nations. (2018). Genebank standards for plant genetic resources for food and agriculture. Food & Agriculture Org.
Cited by
1 articles.
订阅此论文施引文献
订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献