FPGA implementation of systolic sequence alignment

Author:

Hoang Dzung T.,Lopresti Daniel P.

Publisher

Springer Berlin Heidelberg

Reference8 articles.

1. R. J. Lipton and D. P. Lopresti, “A Systolic Array for Rapid String Comparison,” in 1985 Chapel Hill Conference on VLSI, H. Fuchs, Ed. Rockville, MD: Computer Science Press, pp. 363–376, 1985.

2. M. Gokhale, W. Holmes, A. Kopser, S. Lucas, R. Minnich, D. Sweely and D. Lopresti, “Building and Using a Highly Parallel Programmable Logic Array,” Computer, 24, no. 1, pp. 81–89, January 1991.

3. D. P. Lopresti, “Rapid Implementation of a Genetic Sequence Comparator Using Field-Programmable Logic Arrays,” presented at Advanced Research in VLSI Conference, Santa Cruz, March 1991, Invited paper.

4. B. A. Shapiro, “An Algorithm for Comparing Multiple RNA Secondary Structures,” Comput. Applic. Biosci., 4, no. 3, pp. 387–393, 1988.

5. H. Margalit, B. A. Shapiro, A. B. Oppenheim and J. V. M. Jr., “Detection of Common Motifs in RNA Secondary Structures,” Nucleic Acids Research, 17, no. 12, pp. 4829–4845, 1989.

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