In silico quantitative prediction of peptides binding affinity to human MHC molecule: an intuitive quantitative structure–activity relationship approach-Reference-Cited by-同舟云学术

In silico quantitative prediction of peptides binding affinity to human MHC molecule: an intuitive quantitative structure–activity relationship approach

Published:2008-06-25 Issue:3 Volume:36 Page:535-554
ISSN:0939-4451
Container-title:Amino Acids
language:en
Short-container-title:Amino Acids

Author:

Tian F.,Yang L.,Lv F.,Yang Q.,Zhou P.

Publisher

Springer Science and Business Media LLC

Subject

Organic Chemistry,Clinical Biochemistry,Biochemistry

Link

http://link.springer.com/content/pdf/10.1007/s00726-008-0116-8.pdf

Reference70 articles.

1. Altfeld MA, Livingston B, Reshamwala N, Nguyen PT, Addo MM, Shea A, Newman M, Fikes J, Sidney J, Wentworth P, Chesnut R, Eldridge RL, Rosenberg ES, Robbins GK, Brander C, Sax PE, Boswell S, Flynn T, Buchbinder S, Goulder PJR, Walker BD, Sette A, Kalams SA (2001) Identification of novel HLA-A2-restricted human immunodeficiency virus type 1-specific cytotoxic T-lymphocyte epitopes predicted by the HLA-A2 supertype peptide-binding motif. J Virol 75:1301–1311

2. Bigelow CC (1967) On the average hydrophobicity of proteins and the relation between it and protein structure. J Theor Biol 16:187–211

3. Blythe MJ, Doytchinova IA, Flower DR (2002) JenPep: a database of quantitative functional peptide data for immunology. Bioinformatics 18:434–439

4. Brusic V, Flower DR (2007) Bioinformatics tools for identifying T-cell epitopes. Drug Discov Today Biosilico 2:18–23

5. Brusic V, Rudy G, Honeyman G, Hammer J, Harrison L (1998) Prediction of MHC class II-binding peptides using an evolutionary algorithm and artificial neural network. Bioinformatics 14:121–130

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