GateKeeper-GPU: Fast and Accurate Pre-Alignment Filtering in Short Read Mapping-Reference-Cited by-同舟云学术

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GateKeeper-GPU: Fast and Accurate Pre-Alignment Filtering in Short Read Mapping

Published:2024-05 Issue:5 Volume:73 Page:1206-1218
ISSN:0018-9340
Container-title:IEEE Transactions on Computers
language:
Short-container-title:IEEE Trans. Comput.

Author:

Bingöl Zülal¹^ORCID,Alser Mohammed²^ORCID,Mutlu Onur²^ORCID,Ozturk Ozcan³^ORCID,Alkan Can¹^ORCID

Affiliation:

1. Department of Computer Engineering, Bilkent University, Ankara, Turkey

2. Department of Information Technology and Electrical Engineering, ETH Zürich, Switzerland

3. Computer Science and Engineering and Electronics Engineering Programs, Sabancı University, Istanbul, Turkey

Funder

EMBO Installation

Publisher

Institute of Electrical and Electronics Engineers (IEEE)

Link

http://xplorestaging.ieee.org/ielx7/12/10494819/10436437.pdf?arnumber=10436437

Reference43 articles.

1. P4 medicine: how systems medicine will transform the healthcare sector and society

2. Accelerating read mapping with FastHASH

3. Leveraging FPGAs for Accelerating Short Read Alignment

4. Big Data: Astronomical or Genomical?

5. Genetic variation and the de novo assembly of human genomes

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