MeG2: In-Memory Acceleration for Genome Graphs Analysis
Author:
Affiliation:
1. Huazhong University of Science and Technology,National Engineering Research Center for Big Data Technology and System/Services Computing Technology and System Lab/Cluster and Grid Computing Laboratory,Wuhan,China,430074
Funder
National Key Research and Development Program of China
National Natural Science Foundation of China
Publisher
IEEE
Link
http://xplorestaging.ieee.org/ielx7/10247654/10247655/10247956.pdf?arnumber=10247956
Reference18 articles.
1. GenPIP: In-Memory Acceleration of Genome Analysis via Tight Integration of Basecalling and Read Mapping
2. Minimap2: Pairwise Alignment for Nucleotide Sequences;li;Nature Biotechnology,2018
3. PBSIM2: A Simulator for Long-Read Sequencers with a Novel Generative Model of Quality Scores;ono;Bioinformatics,2011
4. Hardware Architecture and Software Stack for PIM Based on Commercial DRAM Technology : Industrial Product
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