Streamlined photoacoustic image processing with foundation models: A training-free solution

Author:

Deng Handi123ORCID,Zhou Yucheng4ORCID,Xiang Jiaxuan5ORCID,Gu Liujie123ORCID,Luo Yan1ORCID,Feng Hai6ORCID,Liu Mingyuan6ORCID,Ma Cheng123ORCID

Affiliation:

1. Beijing National Research Center for Information Science and Technology, Department of Electronic Engineering, Tsinghua University 30 Shuangqing Road, Haidian, Beijing 100084, P. R. China

2. Institute for Precision Healthcare, Tsinghua University, 77 Shuangqing Road, Haidian, Beijing 100084, P. R. China

3. Institute for Intelligent Healthcare, Tsinghua University, 77 Shuangqing Road, Haidian, Beijing 100084, P. R. China

4. School of Biological Science and Medical Engineering, Beihang University, 37 XueYuan Road, Haidian, Beijing 100191, P. R. China

5. TsingPAI Technology Co., Ltd., 27 Jiancaicheng Middle Road, Haidian, Beijing 100096, P. R. China

6. Department of Vascular Surgery, Beijing Friendship Hospital, Capital Medical University, 95 Yongan Road, Haidian, Beijing 100050, P. R. China

Abstract

Foundation models (FMs) have rapidly evolved and have achieved significant accomplishments in computer vision tasks. Specifically, the prompt mechanism conveniently allows users to integrate image prior information into the model, making it possible to apply models without any training. Therefore, we proposed a workflow based on foundation models and zero training to solve the tasks of photoacoustic (PA) image processing. We employed the Segment Anything Model (SAM) by setting simple prompts and integrating the model’s outputs with prior knowledge of the imaged objects to accomplish various tasks, including: (1) removing the skin signal in three-dimensional PA image rendering; (2) dual speed-of-sound reconstruction, and (3) segmentation of finger blood vessels. Through these demonstrations, we have concluded that FMs can be directly applied in PA imaging without the requirement for network design and training. This potentially allows for a hands-on, convenient approach to achieving efficient and accurate segmentation of PA images. This paper serves as a comprehensive tutorial, facilitating the mastery of the technique through the provision of code and sample datasets.

Funder

Strategic Project of Precision Surgery, Tsinghua University

Initiative Scientific Research Program, Institute for Intelligent Healthcare, Tsinghua University

Tsinghua-Foshan Institute of Advanced Manufacturing

National Natural Science Foundation of China

Beijing Nova Program

Young Elite Scientists Sponsorship Program by CAST

Youth Elite Program of Beijing Friendship Hospital

Science and Technology Program of Beijing Tongzhou District

Publisher

World Scientific Pub Co Pte Ltd

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