FAIR Header Reference genome: A TRUSTworthy standard

Author:

Wright AdamORCID,Wilkinson Mark DORCID,Mungall ChrisORCID,Cain ScottORCID,Richards StephenORCID,Sternberg PaulORCID,Provin EllenORCID,Jacobs Jonathan LORCID,Geib ScottORCID,Raciti DanielaORCID,Yook KarenORCID,Stein LincolnORCID,Molik David CORCID

Abstract

The lack of interoperable data standards among reference genome data-sharing platforms inhibits cross-platform analysis while increasing the risk of data provenance loss. Here, we describe the FAIR-bioHeaders Reference genome (FHR), a metadata standard guided by the principles of Findability, Accessibility, Interoperability, and Reuse (FAIR) in addition to the principles of Transparency, Responsibility, User focus, Sustainability, and Technology (TRUST). The objective of FHR is to provide an extensive set of data serialisation methods and minimum data field requirements while still maintaining extensibility, flexibility, and expressivity in an increasingly decentralised genomic data ecosystem. The effort needed to implement FHR is low; FHR's design philosophy ensures easy implementation while retaining the benefits gained from recording both machine and human-readable provenance.

Publisher

Cold Spring Harbor Laboratory

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