Darwin’s Overlooked Radiation: genomic evidence points to the early stages of a radiation in the Galápagos prickly pear cactus (Opuntia,Cactaceae)

Author:

Zapata FelipeORCID,Cerca JoséORCID,McCarney Dana,Henriquez Claudia L.,Tiamiyu Bashir B.,McCormack John E.ORCID,Reckling Kelsey R.,Chaves Jaime A.ORCID,Rivas-Torres Gonzalo

Abstract

SUMMARYThe Galápagos Islands are a prime example of a natural laboratory for the study of evolutionary radiations. While much attention has been devoted to iconic species like Darwin’s finches1–4, the islands offer an equally unique but often overlooked opportunity for plant radiations5. Yet, compared to their animal counterparts, our understanding of the patterns and processes underpinning Galápagos plant radiations remains relatively limited6,7. We present evidence of the early stages of a radiation in prickly-pear cactus (Opuntia, Cactaceae), a plant lineage widespread across the archipelago. Phylogenomic and population genomic analyses show that notwithstanding overall low genetic differentiation across populations, there is marked geographic structure that is broadly consistent with current taxonomy and the dynamic paleogeography of the Galápagos. Because such low genetic differentiation stands in stark contrast to the exceptional eco-phenotypic diversity displayed by cacti across islands, it is plausible that phenotypic plasticity precedes genetic divergence and is the source of adaptive evolution, or that introgression between populations facilitates local adaptation. Models of population relationships including admixture indicate that gene flow is common between certain islands, likely facilitated by dispersal via animals known to feed onOpuntiaflowers, fruits, and seeds across the archipelago. Scans of genetic differentiation between populations reveal candidate loci associated with seed traits and environmental stressors, suggesting that a combination of biotic interactions and abiotic pressures due to the harsh conditions characterizing island life in a volcanic, equatorial archipelago may underlie the diversification of prickly-pear cacti. Considered in concert, these results are relevant to both the mechanisms of plant eco-phenotypic differentiation and the evolutionary history and conservation of the Galápagos biota.

Publisher

Cold Spring Harbor Laboratory

Reference92 articles.

1. Lack, D. (1945). The Galapagos Finches: (Geospizinae): a study in variation (Calif. Acad. of Sciences).

2. Grant, P.R. , and Grant, R.B. (2014). 40 Years of Evolution: Darwin’s Finches on Daphne Major Island (Princeton University Press).

3. Community-wide genome sequencing reveals 30 years of Darwin’s finch evolution

4. Stöcklin, J . (2009). Darwin and the Plants of the Galápagos-Islands. Bauhinia, 33–48.

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