Methodological Approach to Identify and Expand the Volume of Antimicrobial Resistance (AMR) Data in the Human Health Sector in Low- and Middle-Income Countries in Asia: Implications for Local and Regional AMR Surveillance Systems Strengthening

Author:

Joh Hea Sun1ORCID,Yeats Corin2,Shaw Alina3,Poudyal Nimesh1,Gallagher Patrick3,Kim Jong-Hoon1,Shaikh Affan3,Seo Hye Jin1,Chi Kyu-young Kevin1,Prifti Kristi1,Cho Alyssa1,Sujan Mohammad Julhas1,Eraly Emmanuel1,Pham Kien Duc1,Shrestha Subha1,Aboushady Ahmed Taha14,Pak Gideok1,Jang GeunHyeog1,Park Eun Lyeong1,Seo Hyeong-Won1,Abudahab Khalil2,Taylor Ben E W2,Clark Adam4,Dolabella Brooke3,Yoon Hyein1,Han Jihyun1,Kwon Soo Young1,Marks Florian1567,Stelling John4,Aanensen David M2,MacWright William R3,Holm Marianne1

Affiliation:

1. International Vaccine Institute , Seoul , Republic of Korea

2. Centre for Genomic Pathogen Surveillance, Big Data Institute, University of Oxford , Oxford , United Kingdom

3. Public Health Surveillance Group, LLC , Princeton, New Jersey , USA

4. Brigham & Women's Hospital , Harvard Medical School, Boston, Massachusetts , USA

5. Cambridge Institute of Therapeutic Immunology and Infectious Disease, University of Cambridge School of Clinical Medicine , Cambridge , United Kingdom

6. Heidelberg Institute of Global Health, University of Heidelberg , Heidelberg , Germany

7. Madagascar Institute for Vaccine Research, University of Antananarivo , Antananarivo , Madagascar

Abstract

Abstract Antimicrobial resistance (AMR) is a multifaceted global health problem disproportionately affecting low- and middle-income countries (LMICs). The Capturing data on Antimicrobial resistance Patterns and Trends in Use in Regions of Asia (CAPTURA) project was tasked to expand the volume of AMR and antimicrobial use data in Asia. The CAPTURA project used 2 data-collection streams: facility data and project metadata. Project metadata constituted information collected to map out data sources and assess data quality, while facility data referred to the retrospective data collected from healthcare facilities. A down-selection process, labelled “the funnel approach” by the project, was adopted to use the project metadata in prioritizing and selecting laboratories for retrospective AMR data collection. Moreover, the metadata served as a guide for understanding the AMR data once they were collected. The findings from CAPTURA's metadata add to the current discourse on the limitation of AMR data in LMICs. There is generally a low volume of AMR data generated as there is a lack of microbiology laboratories with sufficient antimicrobial susceptibility testing capacity. Many laboratories in Asia are still capturing data on paper, resulting in scattered or unused data not readily accessible or shareable for analyses. There is also a lack of clinical and epidemiological data captured, impeding interpretation and in-depth understanding of the AMR data. CAPTURA's experience in Asia suggests that there is a wide spectrum of capacity and capability of microbiology laboratories within a country and region. As local AMR surveillance is a crucial instrument to inform context-specific measures to combat AMR, it is important to understand and assess current capacity-building needs while implementing activities to enhance surveillance systems.

Publisher

Oxford University Press (OUP)

Subject

Infectious Diseases,Microbiology (medical)

Reference28 articles.

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