Construction and benchmarking of a multi-ethnic reference panel for the imputation of HLA class I and II alleles-Reference-Cited by-同舟云学术

Construction and benchmarking of a multi-ethnic reference panel for the imputation of HLA class I and II alleles

Published:2018-12-26 Issue:12 Volume:28 Page:2078-2092
ISSN:0964-6906
Container-title:Human Molecular Genetics
language:en
Short-container-title:

Author:

Degenhardt Frauke¹,Wendorff Mareike¹,Wittig Michael¹,Ellinghaus Eva²,Datta Lisa W³,Schembri John⁴,Ng Siew C⁵,Rosati Elisa¹,Hübenthal Matthias¹,Ellinghaus David¹,Jung Eun Suk¹⁶,Lieb Wolfgang⁷,Abedian Shifteh⁸⁹,Malekzadeh Reza⁹,Cheon Jae Hee⁶,Ellul Pierre⁴,Sood Ajit¹⁰,Midha Vandana¹⁰¹¹,Thelma B K¹²,Wong Sunny H⁵,Schreiber Stefan¹¹³,Yamazaki Keiko¹⁴¹⁵,Kubo Michiaki¹⁶,Boucher Gabrielle¹⁷,Rioux John D¹⁷¹⁸,Lenz Tobias L¹⁹,Brant Steven R³²⁰²¹,Franke Andre¹

Affiliation:

1. Institute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel, Germany

2. K.G. Jebsen Inflammation Research Centre, Institute of Clinical Medicine, University of Oslo, Oslo University Hospital, Rikshospitalet, Oslo, Norway

3. Department of Medicine, Meyerhoff Inflammatory Bowel Disease Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA

4. Division of Gastroenterology, Mater Dei Hospital, Msida MSD, Malta

5. Department of Medicine and Therapeutics, Institute of Digestive Disease, LKS Institute of Health Science, State Key Laboratory of Digestive Disease, The Chinese University of Hong Kong, Hong Kong, China

6. Department of Internal Medicine and Institute of Gastroenterology, Yonsei University College of Medicine, Seoul, Republic of Korea

7. Biobank PopGen and Institute of Epidemiology, University Hospital Schleswig-Holstein, Campus Kiel, Kiel, Germany

8. Department of Epidemiology, University Medical Center Groningen, RB Groningen, The Netherlands

9. Digestive Disease Research Center, Digestive Disease Research Institute, Tehran University of Medical Sciences, Tehran, Iran

10. Department of Gastroenterology, Dayanand Medical College and Hospital, Ludhiana, Punjab, India

11. Department of Medicine, Dayanand Medical College and Hospital, Ludhiana, Punjab, India

12. Department of Genetics, University of Delhi South Campus, New Delhi, India

13. Department of Medicine, Christian-Albrechts-University of Kiel, Kiel, Germany

14. Laboratory for Genotyping Development, Center for Integrative Medical Sciences, RIKEN Yokohama Institute, Yokohama, Japan

15. Division of Genomic Epidemiology and Clinical Trials, Clinical Trials Research Center, Nihon University School of Medicine, Tokyo, Japan

16. RIKEN Center for Integrative Medical Sciences, Yokohama, Japan

17. Montreal Heart Institute, Research Center, Montréal, Québec, Canada

18. Université de Montréal Department of Medicine, Montréal, Québec, Canada

19. Research Group for Evolutionary Immunogenomics, Max Planck Institute for Evolutionary Biology, Plön, Germany

20. Department of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA

21. Department of Medicine, Rutgers Robert Wood Johnson Medical School and Department of Genetics, Rutgers University, New Brunswick and Piscataway, NJ, USA

Funder

Canada Research Chairs

Federal Ministry of Education and Research

Centre of Excellence in Genome Sciences and Predictive Medicine

Ministry of Health and Welfare

Korea Health Industry Development Institute

Ministry of Education, Culture, Sports, Science, and Technology, Japan

BioBank Japan Project

Institute for Digestive System Disease, Tehran University of Medical Sciences, Tehran, Iran

University Medical Center Groningen

National Institutes of Health

European Union Seventh Framework Programme