1. Goldmine integrates information placing genomic ranges into meaningful biological contexts;Bhasin;Nucleic Acids Res,2016
2. MethylSig: a whole genome DNA methylation analysis pipeline;Park;Bioinformatics,2014
3. BEDTools: a flexible suite of utilities for comparing genomic features;Quinlan;Bioinformatics,2010
4. ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data;Zhu;BMC Bioinformatics,2010