Exploring risk factors and molecular targets in leukemia patients with COVID-19: a bioinformatics analysis of differential gene expression

Author:

Ullah Md Asad1,Moin Abu Tayab2ORCID,Nipa Jannatul Ferdous3,Islam Nafisa Nawal1,Johora Fatema Tuz1,Chowdhury Rahee Hasan2,Islam Saiful4

Affiliation:

1. Department of Biotechnology and Genetic Engineering, Faculty of Biological Sciences, Jahangirnagar University , Savar, Dhaka-1342 , Bangladesh

2. Department of Genetic Engineering and Biotechnology, Faculty of Biological Sciences, University of Chittagong , Hathazari, Chattogram-4331 , Bangladesh

3. Department of Genetic Engineering and Biotechnology, East West University , Aftabnagar, Dhaka-1212 , Bangladesh

4. Bangladesh Council of Scientific and Industrial Research (BCSIR), Chattogram Laboratories , Chittagong Cantonment, Chattogram-4220 , Bangladesh

Abstract

Abstract The molecular mechanism of COVID-19's pathogenic effects in leukemia patients is still poorly known. Our study investigated the possible disease mechanism of COVID-19 and its associated risk factors in patients with leukemia utilizing differential gene expression analysis. We also employed network-based approaches to identify molecular targets that could potentially diagnose and treat COVID-19–infected leukemia patients. Our study demonstrated a shared set of 60 genes that are expressed differentially among patients with leukemia and COVID-19. Most of these genes are expressed in blood and bone marrow tissues and are predominantly implicated in the pathogenesis of different hematologic malignancies, increasingly imperiling COVID-19 morbidity and mortality among the affected patients. Additionally, we also found that COVID-19 may influence the expression of several cancer-associated genes in leukemia patients, such as CCR7, LEF1, and 13 candidate cancer-driver genes. Furthermore, our findings reveal that COVID-19 may predispose leukemia patients to altered blood homeostasis, increase the risk of COVID-19–related liver injury, and deteriorate leukemia-associated injury and patient prognosis. Our findings imply that molecular signatures, like transcription factors, proteins such as TOP21, and 25 different microRNAs, may be potential targets for diagnosing and treating COVID-19–infected leukemia patients. Nevertheless, additional experimental studies will contribute to further validating the study's findings.

Publisher

Oxford University Press (OUP)

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