Mining the Archives: A Cross-Platform Analysis of Gene Expression Profiles in Archival Formalin-Fixed Paraffin-Embedded Tissues-Reference-Cited by-同舟云学术

Mining the Archives: A Cross-Platform Analysis of Gene Expression Profiles in Archival Formalin-Fixed Paraffin-Embedded Tissues

Published:2015-09-10 Issue:2 Volume:148 Page:460-472
ISSN:1096-6080
Container-title:Toxicological Sciences
language:en
Short-container-title:Toxicol. Sci.

Author:

Webster A. Francina,Zumbo Paul,Fostel Jennifer,Gandara Jorge,Hester Susan D.,Recio Leslie,Williams Andrew,Wood Charles E.,Yauk Carole L.,Mason Christopher E.

Publisher

Oxford University Press (OUP)

Subject

Toxicology

Link

http://academic.oup.com/toxsci/article-pdf/148/2/460/16689626/kfv195.pdf

Reference49 articles.

1. Auerbach S. S. Phadke D. P. Mav D. Holmgren S. Gao Y. Xie B. Shin J. H. Shah R. R. Merrick B. A. Tice R. R. (2014). RNA-Seq-based toxicogenomic assessment of fresh frozen and formalin-fixed tissues yields similar mechanistic insights. J. Appl. Toxicol.

2. A Review of Preanalytical Factors Affecting Molecular, Protein, and Morphological Analysis of Formalin-Fixed, Paraffin-Embedded (FFPE) Tissue: How Well Do You Know Your FFPE Specimen?

3. Controlling the false discovery rate: A practical and powerful approach to multiple testing;Benjamini;J. R. Stat. Soc. Ser. B (Methodological),1995

4. Comparison of Microarrays and RNA-Seq for Gene Expression Analyses of Dose-Response Experiments

5. A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

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