Automated Detection of Anatomical Landmarks During Colonoscopy Using a Deep Learning Model

Author:

Taghiakbari Mahsa12,Hamidi Ghalehjegh Sina3,Jehanno Emmanuel3,Berthier Tess3,di Jorio Lisa3,Ghadakzadeh Saber3,Barkun Alan4,Takla Mark12,Bouin Mickael25,Deslandres Eric5,Bouchard Simon5,Sidani Sacha5,Bengio Yoshua1,von Renteln Daniel25

Affiliation:

1. Faculty of Medicine, Department of Biomedical Sciences, University of Montreal , Montreal, Quebec , Canada

2. Department of Medicine, Division of Gastroenterology, University of Montreal Hospital Research Center (CRCHUM) , Montreal, Quebec , Canada

3. Department of Artificial Intelligence, Imagia Canexia Health Inc. , Montreal , Canada

4. Division of Gastroenterology, McGill University Health Center, McGill University , Montreal, Quebec , Canada

5. Division of Gastroenterology, University of Montreal Hospital Center (CHUM) , Montreal, Quebec , Canada

Abstract

Abstract Background and aims Identification and photo-documentation of the ileocecal valve (ICV) and appendiceal orifice (AO) confirm completeness of colonoscopy examinations. We aimed to develop and test a deep convolutional neural network (DCNN) model that can automatically identify ICV and AO, and differentiate these landmarks from normal mucosa and colorectal polyps. Methods We prospectively collected annotated full-length colonoscopy videos of 318 patients undergoing outpatient colonoscopies. We created three nonoverlapping training, validation, and test data sets with 25,444 unaltered frames extracted from the colonoscopy videos showing four landmarks/image classes (AO, ICV, normal mucosa, and polyps). A DCNN classification model was developed, validated, and tested in separate data sets of images containing the four different landmarks. Results After training and validation, the DCNN model could identify both AO and ICV in 18 out of 21 patients (85.7%). The accuracy of the model for differentiating AO from normal mucosa, and ICV from normal mucosa were 86.4% (95% CI 84.1% to 88.5%), and 86.4% (95% CI 84.1% to 88.6%), respectively. Furthermore, the accuracy of the model for differentiating polyps from normal mucosa was 88.6% (95% CI 86.6% to 90.3%). Conclusion This model offers a novel tool to assist endoscopists with automated identification of AO and ICV during colonoscopy. The model can reliably distinguish these anatomical landmarks from normal mucosa and colorectal polyps. It can be implemented into automated colonoscopy report generation, photo-documentation, and quality auditing solutions to improve colonoscopy reporting quality.

Funder

MEDTEQ

Publisher

Oxford University Press (OUP)

Subject

Pharmacology (medical)

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