The 3D genome and its impacts on human health and disease

Author:

Wang Siqi1,Luo Zhengyu1,Liu Weiguang1,Hu Tengfei1,Zhao Zhongying2,Rosenfeld Michael G3,Song Xiaoyuan1

Affiliation:

1. MOE Key Laboratory of Cellular Dynamics, Hefei National Research Center for Physical Sciences at the Microscale, CAS Key Laboratory of Brain Function and Disease, School of Life Sciences, Division of Life Sciences and Medicine, University of Science and Technology of China , Hefei 230026 , China

2. Department of Biology, Hong Kong Baptist University , Hong Kong 999077 , China

3. Howard Hughes Medical Institute, Department and School of Medicine, University of California, San Diego , La Jolla, CA 92093 , USA

Abstract

Abstract Eukaryotic genomes are highly compacted in the cell nucleus. Two loci separated by a long linear distance can be brought into proximity in space through DNA-binding proteins and RNAs, which contributes profoundly to the regulation of gene expression. Recent technology advances have enabled the development and application of the chromosome conformation capture (3C) technique and a host of 3C-based methods that enable genome-scale investigations into changes in chromatin high-order structures during diverse physiological processes and diseases. In this review, we introduce 3C-based technologies and discuss how they can be utilized to glean insights into the impacts of three-dimensional (3D) genome organization in normal physiological and disease processes.

Funder

National Key Research and Development Program of China

National Natural Science Foundation of China

Publisher

Oxford University Press (OUP)

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