RSAT matrix-clustering: dynamic exploration and redundancy reduction of transcription factor binding motif collections-Reference-Cited by-同舟云学术

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RSAT matrix-clustering: dynamic exploration and redundancy reduction of transcription factor binding motif collections

Published:2017-06-07 Issue:13 Volume:45 Page:e119-e119
ISSN:0305-1048
Container-title:Nucleic Acids Research
language:en
Short-container-title:

Author:

Castro-Mondragon Jaime Abraham¹^ORCID,Jaeger Sébastien²,Thieffry Denis³,Thomas-Chollier Morgane³,van Helden Jacques¹

Affiliation:

1. Aix Marseille Univ, INSERM, TAGC, Theory and Approaches of Genomic Complexity, UMR_S 1090, Marseille, France

2. Aix Marseille Univ, CNRS, INSERM, CIML, Marseille, France

3. IBENS, Département de Biologie, Ecole Normale Supérieure, CNRS, Inserm, PSL Research University, F-75005 Paris, France

Publisher

Oxford University Press (OUP)

Subject

Genetics

Link

http://academic.oup.com/nar/article-pdf/45/13/e119/25367647/gkx314.pdf

Reference66 articles.

1. DNA binding sites: representation and discovery;Stormo;Bioinformatics,2000

2. Information content of binding sites on nucleotide sequences;Schneider;J. Mol. Biol.,1986

3. Evaluation of methods for modeling transcription factor sequence specificity;Weirauch;Nat. Biotechnol.,2013

4. DNA-binding specificities of human transcription factors;Jolma;Cell,2013

5. The next generation of transcription factor binding site prediction;Mathelier;PLoS Comput. Biol.,2013

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