FluReassort: a database for the study of genomic reassortments among influenza viruses

Author:

Ding Xiao1ORCID,Yuan Xuye2,Mao Longfei3,Wu Aiping3,Jiang Taijiao4

Affiliation:

1. Suzhou Institute of Systems Medicine, Center of Systems Medicine, Chinese Academy of Medical Sciences & Peking Union Medical College

2. Xi'an Jiaotong-Liverpool University, Department of Biological Sciences

3. Chinese Academy of Medical Sciences and Peking Union Medical College, Suzhou Institute of Systems Medicine

4. Chinese Academy of Medical Sciences and Peking Union Medical College, Center for Systems Medicine, Institute of Basic Medical Sciences

Abstract

Abstract Genomic reassortment is an important genetic event in the generation of emerging influenza viruses, which can cause numerous serious flu endemics and epidemics within hosts or even across different hosts. However, there is no dedicated and comprehensive repository for reassortment events among influenza viruses. Here, we present FluReassort, a database for understanding the genomic reassortment events in influenza viruses. Through manual curation of thousands of literature references, the database compiles 204 reassortment events among 56 subtypes of influenza A viruses isolated in 37 different countries. FluReassort provides an interface for the visualization and evolutionary analysis of reassortment events, allowing users to view the events through the phylogenetic analysis with varying parameters. The reassortment networks in FluReassort graphically summarize the correlation and causality between different subtypes of the influenza virus and facilitate the description and interpretation of the reassortment preference among subtypes. We believe FluReassort is a convenient and powerful platform for understanding the evolution of emerging influenza viruses. FluReassort is freely available at https://www.jianglab.tech/FluReassort.

Funder

National Natural Science Foundation of China

CAMS Initiative for Innovative Medicine

National Key Plan for Scientific Research and Development of China

Central Public-Interest Scientific Institution Basal Research Fund

National Basic Research Program of China

Non-profit Central Research Institute Fund of Chinese Academy of Medical Sciences

Publisher

Oxford University Press (OUP)

Subject

Molecular Biology,Information Systems

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