CSDE1 promotes miR-451 biogenesis

Author:

Kakumani Pavan Kumar1ORCID,Ko Yunkoo2,Ramakrishna Sushmitha1,Christopher Grace1,Dodgson Maria1,Shrinet Jatin3,Harvey Louis-Mathieu45,Shin Chanseok267,Simard Martin J45

Affiliation:

1. Department of Biochemistry, Memorial University of Newfoundland , 45 Arctic Avenue , St. John's NL A1C 5S7,  Canada

2. Department of Agricultural Biotechnology, Seoul National University , Seoul  08826 , Republic of Korea

3. Department of Biological Science, Florida State University , 319 Stadium Drive, Tallahassee , FL  32306-4295 , USA

4. Oncology Division, Centre Hospitalier Universitaire de Québec-Université Laval Research Center (L’Hôtel-Dieu de Québec) , Quebec City , Québec  G1R 3S3 , Canada

5. Laval University Cancer Research Centre , Québec City , Québec  G1R 3S3 , Canada

6. Research Center for Plant Plasticity, Seoul National University , Seoul  08826 , Republic of Korea

7. Research Institute of Agriculture and Life Sciences, and Plant Genomics and Breeding Institute, Seoul National University , Seoul  08826 , Republic of Korea

Abstract

Abstract MicroRNAs are sequentially processed by RNase III enzymes Drosha and Dicer. miR-451 is a highly conserved miRNA in vertebrates which bypasses Dicer processing and instead relies on AGO2 for its maturation. miR-451 is highly expressed in erythrocytes and regulates the differentiation of erythroblasts into mature red blood cells. However, the mechanistic details underlying miR-451 biogenesis in erythrocytes remains obscure. Here, we report that the RNA binding protein CSDE1 which is required for the development of erythroblasts into erythrocytes, controls the expression of miR-451 in erythroleukemia cells. CSDE1 binds miR-451 and regulates AGO2 processing of pre-miR-451 through its N-terminal domains. CSDE1 further interacts with PARN and promotes the trimming of intermediate miR-451 to the mature length. Together, our results demonstrate that CSDE1 promotes biogenesis of miR-451 in erythroid progenitors.

Funder

Dean of Science Startup Funds

Memorial University of Newfoundland and Discovery

Natural Sciences and Engineering Research Council of Canada

Canadian Institutes of Health Research

National Research Foundation of Korea

Ministry of Science and ICT (MSIT), Republic of Korea

The New Breeding Technologies Development Program

Rural Development Administration Republic of Korea

Publisher

Oxford University Press (OUP)

Subject

Genetics

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