HMPDACC: a Human Microbiome Project Multi-omic data resource

Author:

Creasy Heather Huot1ORCID,Felix Victor1,Aluvathingal Jain1,Crabtree Jonathan1,Ifeonu Olukemi1,Matsumura James1,McCracken Carrie1,Nickel Lance1,Orvis Joshua1,Schor Mike1,Giglio Michelle1,Mahurkar Anup1,White Owen1

Affiliation:

1. Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD 21201, USA

Abstract

Abstract The Human Microbiome Project (HMP) explored microbial communities of the human body in both healthy and disease states. Two phases of the HMP (HMP and iHMP) together generated >48TB of data (public and controlled access) from multiple, varied omics studies of both the microbiome and associated hosts. The Human Microbiome Project Data Coordination Center (HMPDACC) was established to provide a portal to access data and resources produced by the HMP. The HMPDACC provides a unified data repository, multi-faceted search functionality, analysis pipelines and standardized protocols to facilitate community use of HMP data. Recent efforts have been put toward making HMP data more findable, accessible, interoperable and reusable. HMPDACC resources are freely available at www.hmpdacc.org.

Funder

National Institutes of Health

Publisher

Oxford University Press (OUP)

Subject

Genetics

Reference22 articles.

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2. The Integrative Human Microbiome Project: Dynamic Analysis of Microbiome-Host Omics Profiles during Periods of Human Health and Disease;The Integrative HMP (iHMP) Research Network Consortium;Cell Host Microbe,2014

3. The Integrative Human Microbiome Project;The Integrative HMP (iHMP) Research Network Consortium;Nature,2019

4. Longitudinal multi-omics of host-microbe dynamics in prediabetes;Zhou;Nature,2019

5. Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases;Lloyd-Price;Nature,2019

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