The Ascomycota Tree of Life: A Phylum-wide Phylogeny Clarifies the Origin and Evolution of Fundamental Reproductive and Ecological Traits

Author:

Schoch Conrad L.1,Sung Gi-Ho1,López-Giráldez Francesc2,Townsend Jeffrey P.2,Miadlikowska Jolanta3,Hofstetter Valérie4,Robbertse Barbara1,Matheny P. Brandon56,Kauff Frank7,Wang Zheng2,Gueidan Cécile8,Andrie Rachael M.1,Trippe Kristin1,Ciufetti Linda M.1,Wynns Anja9,Fraker Emily3,Hodkinson Brendan P.3,Bonito Gregory3,Groenewald Johannes Z.8,Arzanlou Mahdi810,Sybren de Hoog G.8,Crous Pedro W.8,Hewitt David11,Pfister Donald H.11,Peterson Kristin11,Gryzenhout Marieka12,Wingfield Michael J.12,Aptroot André13,Suh Sung-Oui14,Blackwell Meredith15,Hillis David M.16,Griffith Gareth W.17,Castlebury Lisa A.18,Rossman Amy Y.18,Lumbsch H. Thorsten19,Lücking Robert19,Büdel Burkhard20,Rauhut Alexandra20,Diederich Paul21,Ertz Damien22,Geiser David M.23,Hosaka Kentaro24,Inderbitzin Patrik25,Kohlmeyer Jan26,Volkmann-Kohlmeyer Brigitte26,Mostert Lizel27,O'Donnell Kerry28,Sipman Harrie29,Rogers Jack D.30,Shoemaker Robert A.31,Sugiyama Junta32,Summerbell Richard C.33,Untereiner Wendy34,Johnston Peter R.35,Stenroos Soili36,Zuccaro Alga37,Dyer Paul S.38,Crittenden Peter D.38,Cole Mariette S.39,Hansen Karen40,Trappe James M.41,Yahr Rebecca42,Lutzoni François3,Spatafora Joseph W.1

Affiliation:

1. Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR 97331, USA

2. Department of Ecology and Evolutionary Biology, Yale University, 165 Prospect Street, New Haven, CT 06520, USA

3. Department of Biology, Duke University, Durham, NC 27708, USA

4. Swiss Federal Research Station for Plant Production of Changins (RAC), PO Box 254, CH-1260 Nyon 1, Switzerland

5. Biology Department, Clark University, Worcester, MA 01610, USA

6. Department of Ecology and Evolutionary Biology, University of Tennessee, 569 Dabney Hall, Knoxville, TN 37996, USA

7. Molecular Phylogenetics, FB Biologie, 13/276, TU Kaiserslautern, Postfach 3049, 67653 Kaiserslautern, Germany

8. Centraalbureau voor Schimmelcultures, Fungal Biodiversity Centre, PO Box 85167, 3508 AD, Utrecht, the Netherlands

9. Department of Zoology, Copenhagen University Institute for Ecology, Thorvaldsensvej 40, 1871 Frederiksberg, Copenhagen, Denmark

10. Plant Protection Department, Agriculture Faculty, University of Tabriz, PO Box: 5166614766, Tabriz, Iran

11. Department of Organismic and Evolutionary Biology, Harvard University, 22 Divinity Avenue, Cambridge, MA 021 38, USA

12. Forestry & Agricultural Biotechnology Institute, University of Pretoria, Pretoria 0002, South Africa

13. Adviesbureau voor Bryologie en Lichenologie, G.v.d.Veenstraat 107, NL-3762 XK Soest, the Netherlands

14. Mycology Program, American Type Culture Collection, 10801 University Boulevard, Manassas, VA 20110, USA

15. Department of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA

16. Section of Integrative Biology, University of Texas, Austin, TX 78712, USA

17. Institute of Biological, Environmental and Rural Sciences, Aberystwyth University, Aberystwyth, Ceredigion SY23 3DD, Wales, UK

18. United States Department of Agriculture, Agricultural Research Service, Systematic Mycology and Microbiology Laboratory, 10300 Baltimore Avenue, Beltsville, MD 20705, USA

19. Department of Botany, The Field Museum, 1400 South Lake Shore Drive, Chicago, IL 60605, USA

20. Fachbereich Biologie, Abteilung Pflanzenökologie und Systematik, 67653 Kaiserslautern, Germany

21. Musée National d'Histoire Naturelle, L-2160 Luxembourg, Luxembourg

22. Department of Cryptogamy (BT), National Botanical Garden of Belgium, Domaine de Bouchout, B-1860 Meise, Belgium

23. Department of Plant Pathology, Pennsylvania State University, University Park, PA 16802, USA

24. Department of Botany, National Museum of Nature and Science, Tsukuba-shi, Ibaraki 305-0005, Japan

25. University of California, Kearney Agricultural Center, 9240 South Riverbend Avenue, Parlier, CA 93648, USA

26. Institute of Marine Sciences, University of North Carolina at Chapel Hill, Morehead City, NC 28557, USA

27. Department of Plant Pathology, University of Stellenbosch, Private Bag X1, Matieland 7602, South Africa

28. Microbial Genomics Research Unit, National Center for Agricultural Utilization Research, U.S. Department of Agriculture, Agricultural Research, Service, Peoria, IL 61604, USA

29. Botanischer Garten und Botanisches Museum Berlin-Dahlem, Freie Universität Berlin, Königin-Luise-Straße, 6-8, D-14195 Berlin, Germany

30. Department of Plant Pathology, Washington State University, Pullman, WA 99164, USA

31. Biodiversity (Mycology and Botany), Agriculture and Agri-Food Canada, Ottawa, Ontario K1A 0C6, Canada

32. TechnoSuruga Laboratory Co. Ltd., Tokyo Office, Chiyoda-ku, Tokyo 101-0052, Japan

33. 27 Hillcrest Park, Toronto, Ontario M4X 1E8, Canada

34. Department of Biology, Brandon University, Brandon, Manitoba R7A 6A9, Canada

35. Herbarium PDD, Landcare Research, Private Bag 92170, Auckland, New Zealand

36. Botanical Museum, Finnish Museum of Natural History, PO Box 7, FI-00014 University of Helsinki, Finland

37. Institute of Phytopathology and Applied Zoology, University of Giessen, D-35392 Giessen, Germany

38. School of Biology, University of Nottingham, Nottingham NG7 2RD, UK

39. 2017 Thure Avenue, St. Paul, Minnesota 55116, USA

40. Department of Cryptogamic Botany, Swedish Museum of Natural History, Box 50007, SE-10405 Stockholm, Sweden

41. Department of Forest Science, Oregon State University, Corvallis, Oregon 97331, USA

42. Royal Botanic Garden Edinburgh, 20A Inverleith Row, Edinburgh, EH3 5LR, UK

Publisher

Oxford University Press (OUP)

Subject

Genetics,Ecology, Evolution, Behavior and Systematics

Reference75 articles.

1. ProtTest: selection of best-fit models of protein evolution;Abascal;Bioinformatics,2005

2. A kingdom-level phylogeny of eukaryotes based on combined protein data;Baldauf;Science,2000

3. Two ascomycete classes based on fruiting-body characters and ribosomal DNA Sequence;Berbee;Mol. Biol. Evol.,1992

4. Minute mycological mysteries: the influence of arthropods on the lives of fungi;Blackwell;Mycologia,1994

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