Enhancing the predictions of cytomegalovirus infection in severe ulcerative colitis using a deep learning ensemble model (Preprint)

Author:

Kim Jeong Heon,Choe A Reum,Byeon Ju Ran,Park Yehyun,Song Eun Mi,Kim Seong-Eun,Jeong Eui Sun,Lee Rena,Kim Jin Sung,Ahn So HyunORCID,Jung Sung Ae

Abstract

BACKGROUND

Cytomegalovirus (CMV) reactivation is common among patients with severe ulcerative colitis (UC), resulting in poorer prognoses than patients without CMV reactivation. The principal diagnostic approach for CMV involves biopsies, which are time-consuming and present challenges for early detection.

OBJECTIVE

To address this issue, our study utilizes deep learning to differentiate CMV from severe UC using endoscopic imaging, thereby enabling early CMV diagnosis.

METHODS

In this study, we examined 86 endoscopic images employing an ensemble of deep learning models, notably Densenet 121 pre-trained on ImageNet, to discriminate between cases of UC with and without CMV complications. Extensive preprocessing and test-time augmentation (TTA) techniques were applied to enhance the effectiveness of the models. Evaluation of the models' performance included metrics such as accuracy, precision, recall, F1 score, receiver operating characteristic (ROC) curves, and AUC values, highlighting the potential of deep learning to improve non-invasive gastroenterology diagnostics.

RESULTS

An ensemble of four models augmented with TTA demonstrated superior performance in classifying UC endoscopic images. It attained an accuracy of 0.83, precision of 0.83, recall of 0.91, and an F1-score of 0.87. These metrics underscore the ensemble's reliability and well-rounded performance. Particularly noteworthy is the substantial decline in performance metrics observed in models without TTA, highlighting the critical role of TTA.

CONCLUSIONS

Our findings underscore the effectiveness of deep learning models in distinguishing CMV from severe UC in endoscopy images, providing a viable approach for non-invasive diagnostics and timely therapeutic interventions

CLINICALTRIAL

Publisher

JMIR Publications Inc.

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3