A neomorphic mutation in the interferon activation domain of IRF4 causes a dominant primary immunodeficiency

Author:

Thouenon Romane123ORCID,Chentout Loïc123ORCID,Moreno-Corona Nidia123ORCID,Poggi Lucie123ORCID,Lombardi Emilia Puig45ORCID,Hoareau Benedicte67ORCID,Schmitt Yohann89ORCID,Lagresle-Peyrou Chantal12310ORCID,Bustamante Jacinta11121314ORCID,André Isabelle123ORCID,Cavazzana Marina110151617ORCID,Durandy Anne23ORCID,Casanova Jean-Laurent1112131819ORCID,Galicier Lionel2021ORCID,Fadlallah Jehane2021ORCID,Fischer Alain16171822ORCID,Kracker Sven123ORCID

Affiliation:

1. Université Paris Cité 1 , Paris, France

2. Laboratory of Human Lymphohematopoiesis, Imagine Institute, INSERM 2 , Paris, France

3. UMR 1163 2 , Paris, France

4. Université de Paris, Bioinformatics Core Facility, Imagine Institute, INSERM 3 , Paris, France

5. UMR 1163 3 , Paris, France

6. Sorbonne Université 4 , Paris, France

7. , UMS037, PASS, Plateforme de Cytométrie de la Pitié-Salpêtrière 4 , Paris, France

8. Plateforme de génomique, Institut Imagine-Structure Fédérative de Recherche Necker, INSERM 5 , Paris, France

9. U1163 et INSERM US24/CNRS UMS3633, Université de Paris 5 , Paris, France

10. Biotherapy Clinical Investigation Center, Groupe Hospitalier Universitaire Ouest, Assistance Publique-Hôpitaux de Paris, INSERM 6 , Paris, France

11. St. Giles Laboratory of Human Genetics of Infectious Diseases, Rockefeller Branch, The Rockefeller University 7 , New York, NY, USA

12. Laboratory of Human Genetics of Infectious Diseases, Necker Branch, INSERM 8 , Paris, France

13. U1163, Necker Hospital for Sick Children 8 , Paris, France

14. Paris Hospital, Study Center for Primary Immunodeficiencies, Assistance Publique-Hôpitaux de Paris 9 , Paris, France

15. Departement de Biotherapie Hôpital Universitaire Necker-Enfants malades, Groupe Hospitalier Paris Centre Assistance Publique-Hôpitaux de Paris 10 , Paris, France

16. Imagine Institute, INSERM 11 , Paris, France

17. UMR 1163 11 , Paris, France

18. Necker Hospital, Pediatric Hematology-Immunology and Rheumatology Unit, Assistance Publique-Hôpitaux de Paris 12 , Paris, France

19. Howard Hughes Medical Institute 13 , New York, NY, USA

20. Clinical Immunology Department, Hôpital Saint Louis, Université de Paris 14 , Paris, France

21. National Reference Center for Castleman disease, Hôpital Saint Louis, Université de Paris 15 , Paris, France

22. Collège de France 16 , Paris, France

Abstract

Here, we report on a heterozygous interferon regulatory factor 4 (IRF4) missense variant identified in three patients from a multigeneration family with hypogammaglobulinemia. Patients’ low blood plasmablast/plasma cell and naïve CD4 and CD8 T cell counts contrasted with high terminal effector CD4 and CD8 T cell counts. Expression of the mutant IRF4 protein in control lymphoblastoid B cell lines reduced the expression of BLIMP-1 and XBP1 (key transcription factors in plasma cell differentiation). In B cell lines, the mutant IRF4 protein as wildtype was found to bind to known IRF4 binding motifs. The mutant IRF4 failed to efficiently regulate the transcriptional activity of interferon-stimulated response elements (ISREs). Rapid immunoprecipitation mass spectrometry of endogenous proteins indicated that the mutant and wildtype IRF4 proteins differed with regard to their respective sets of binding partners. Our findings highlight a novel mechanism for autosomal-dominant primary immunodeficiency through altered protein binding by mutant IRF4 at ISRE, leading to defective plasma cell differentiation.

Funder

Institut National de la Santé et de la Recherche Médicale

Agence Nationale de la Recherche

Ligue Contre le Cancer

Publisher

Rockefeller University Press

Subject

Immunology,Immunology and Allergy

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