The complete mitochondrial genome of Gyps coprotheres (Aves, Accipitridae, Accipitriformes): phylogenetic analysis of mitogenome among raptors

Author:

Adawaren Emmanuel Oluwasegun1,Du Plessis Morne2,Suleman Essa34,Kindler Duodane3,Oosthuizen Almero O.2,Mukandiwa Lillian5,Naidoo Vinny6

Affiliation:

1. Department of Paraclinical Science/Faculty of Veterinary Science, University of Pretoria, Pretoria, Gauteng, South Africa

2. Bioinformatics and Comparative Genomics, South African National Biodiversity Institute, Pretoria, Gauteng, South Africa

3. Molecular Diagnostics, Council for Scientific and Industrial Research, Pretoria, Gauteng, South Africa

4. Current affiliation:, Bioinformatics and Comparative Genomics, South African National Biodiversity Institute, Pretoria, Gauteng, South Africa

5. Department of Paraclinical Science/Faculty of Veterinary Science, University of Pretoria, South Africa

6. Paraclinical Science/Faculty of Veterinary Science, University of Pretoria, Pretoria, Gauteng, South Africa

Abstract

Three species of Old World vultures on the Asian peninsula are slowly recovering from the lethal consequences of diclofenac. At present the reason for species sensitivity to diclofenac is unknown. Furthermore, it has since been demonstrated that other Old World vultures like the Cape (Gyps coprotheres; CGV) and griffon (G. fulvus) vultures are also susceptible to diclofenac toxicity. Oddly, the New World Turkey vulture (Cathartes aura) and pied crow (Corvus albus) are not susceptible to diclofenac toxicity. As a result of the latter, we postulate an evolutionary link to toxicity. As a first step in understanding the susceptibility to diclofenac toxicity, we use the CGV as a model species for phylogenetic evaluations, by comparing the relatedness of various raptor species known to be susceptible, non-susceptible and suspected by their relationship to the Cape vulture mitogenome. This was achieved by next generation sequencing and assembly. The Cape vulture mitogenome had a genome size of 16,908 bp. The mitogenome phylogenetic analysis indicated a close evolutionary relationship between Old World vultures and other members of the Accipitridae as indicated by bootstrap value of 100% on the phylogenetic trees. Based on this, we postulate that the other species could also be sensitive to the toxic effects of diclofenac. This warrants further investigations.

Funder

Thermo Fisher Scientific

National Research Foundation (NRF) of South Africa

Publisher

PeerJ

Subject

General Agricultural and Biological Sciences,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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