Opera: Reconstructing Optimal Genomic Scaffolds with High-Throughput Paired-End Sequences-Reference-Cited by-同舟云学术

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Opera: Reconstructing Optimal Genomic Scaffolds with High-Throughput Paired-End Sequences

Published:2011-11 Issue:11 Volume:18 Page:1681-1691
ISSN:1066-5277
Container-title:Journal of Computational Biology
language:en
Short-container-title:Journal of Computational Biology

Author:

Gao Song¹,Sung Wing-Kin²³,Nagarajan Niranjan³

Affiliation:

1. NUS Graduate School for Integrative Sciences and Engineering, National University of Singapore, Singapore.

2. School of Computing, National University of Singapore, Singapore.

3. Computational and Systems Biology, Genome Institute of Singapore, Singapore.

Publisher

Mary Ann Liebert Inc

Subject

Computational Theory and Mathematics,Computational Mathematics,Genetics,Molecular Biology,Modeling and Simulation

Link

http://www.liebertpub.com/doi/pdf/10.1089/cmb.2011.0170

Reference24 articles.

1. Whole-Genome Shotgun Assembly and Analysis of the Genome of Fugu rubripes

2. De novo fragment assembly with short mate-paired reads: Does the read length matter?

3. SOPRA: Scaffolding algorithm for paired reads via statistical optimization

4. Real-Time DNA Sequencing from Single Polymerase Molecules

5. Phylogenetic comparative assembly

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