Exact and Heuristic Algorithms for the Indel Maximum Likelihood Problem-Reference-Cited by-同舟云学术

Exact and Heuristic Algorithms for the Indel Maximum Likelihood Problem

Published:2007-05 Issue:4 Volume:14 Page:446-461
ISSN:1066-5277
Container-title:Journal of Computational Biology
language:en
Short-container-title:Journal of Computational Biology

Author:

Diallo Abdoulaye Banire¹²,Makarenkov Vladimir²,Blanchette Mathieu³

Affiliation:

1. McGill Centre for Bioinformatics and School of Computer Science, McGill University, Montréal, Québec, Canada.

2. Département d'Informatique, Université du Québec à Montréal, Montréal, Québec, Canada.

3. McGill Centre for Bioinformatics and School of Computer Science, McGill University, 3775 University St., Montréal, Québec, H3A 2B4, Canada. blanchem@mcb.mcgill.ca

Publisher

Mary Ann Liebert Inc

Subject

Computational Theory and Mathematics,Computational Mathematics,Genetics,Molecular Biology,Modelling and Simulation

Link

http://www.liebertpub.com/doi/pdf/10.1089/cmb.2007.A006

Reference25 articles.

1. The past as the key to the present: Resurrection of ancient proteins from eosinophils

2. Reconstructing large regions of an ancestral mammalian genome in silico

3. Aligning Multiple Genomic Sequences With the Threaded Blockset Aligner

4. MAVID: Constrained Ancestral Alignment of Multiple Sequences

5. LAGAN and Multi-LAGAN: Efficient Tools for Large-Scale Multiple Alignment of Genomic DNA

Cited by 31 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Engineering indel and substitution variants of diverse and ancient enzymes using Graphical Representation of Ancestral Sequence Predictions (GRASP);PLOS Computational Biology;2022-10-24

2. EvoVGM;Proceedings of the 13th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics;2022-08-07

3. ARPIP: Ancestral Sequence Reconstruction with Insertions and Deletions under the Poisson Indel Process;Systematic Biology;2022-07-22

4. General continuous-time Markov model of sequence evolution via insertions/deletions: local alignment probability computation;BMC Bioinformatics;2016-09-27

5. General continuous-time Markov model of sequence evolution via insertions/deletions: are alignment probabilities factorable?;BMC Bioinformatics;2016-09-17