GeneDMRs: An R Package for Gene-Based Differentially Methylated Regions Analysis-Reference-Cited by-同舟云学术

GeneDMRs: An R Package for Gene-Based Differentially Methylated Regions Analysis

Published:2021-03-01 Issue:3 Volume:28 Page:304-316
ISSN:1557-8666
Container-title:Journal of Computational Biology
language:en
Short-container-title:Journal of Computational Biology

Author:

Wang Xiao¹,Hao Dan²³,Kadarmideen Haja N.¹

Affiliation:

1. Quantitative Genomics, Bioinformatics and Computational Biology Group, Department of Applied Mathematics and Computer Science, Technical University of Denmark, Kongens Lyngby, Denmark.

2. College of Animal Science and Technology, Northwest A&F University, Yangling, China.

3. Department of Molecular Biology and Genetics, Aarhus University, Aarhus C, Denmark.

Publisher

Mary Ann Liebert Inc

Subject

Computational Theory and Mathematics,Computational Mathematics,Genetics,Molecular Biology,Modeling and Simulation

Link

https://www.liebertpub.com/doi/pdf/10.1089/cmb.2020.0081

Reference37 articles.

1. genomation: a toolkit to summarize, annotate and visualize genomic intervals

2. methylKit: a comprehensive R package for the analysis of genome-wide DNA methylation profiles

3. Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays

4. Comprehensive analysis of DNA methylation data with RnBeads

5. The control of the false discovery rate in multiple testing under dependency

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