Challenges Associated with Investigating Salmonella Enteritidis with Low Genomic Diversity in New York State: The Impact of Adjusting Analytical Methods and Correlation with Epidemiological Data
Author:
Affiliation:
1. New York State Department of Health, Wadsworth Center, Albany, New York, USA.
2. New York State Department of Health, Bureau of Communicable Disease Control, Albany, New York, USA.
Publisher
Mary Ann Liebert Inc
Subject
Animal Science and Zoology,Applied Microbiology and Biotechnology,Food Science,Microbiology
Link
https://www.liebertpub.com/doi/pdf/10.1089/fpd.2022.0068
Reference21 articles.
1. Interpretation of Whole-Genome Sequencing for Enteric Disease Surveillance and Outbreak Investigation
2. CFSAN SNP Pipeline: an automated method for constructing SNP matrices from next-generation sequence data
3. Comparative Analysis of Subtyping Methods against a Whole-Genome-Sequencing Standard for Salmonella enterica Serotype Enteritidis
4. Integrated Whole-Genome Sequencing Infrastructure for Outbreak Detection and Source Tracing of Salmonella enterica Serotype Enteritidis
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