ATAC-DEA: A Web-Based ATAC-Seq Data Differential Peak and Annotation Analysis Application-Reference-Cited by-同舟云学术

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ATAC-DEA: A Web-Based ATAC-Seq Data Differential Peak and Annotation Analysis Application

Published:2023-03-01 Issue:3 Volume:30 Page:337-345
ISSN:1557-8666
Container-title:Journal of Computational Biology
language:en
Short-container-title:Journal of Computational Biology

Author:

Zhang Shilong¹,Wang Sufang¹^ORCID

Affiliation:

1. School of Life Sciences, Northwestern Polytechnical University, Xi'an, Shaanxi, China.

Publisher

Mary Ann Liebert Inc

Subject

Computational Theory and Mathematics,Computational Mathematics,Genetics,Molecular Biology,Modeling and Simulation

Link

https://www.liebertpub.com/doi/pdf/10.1089/cmb.2022.0033

Reference18 articles.

1. I-ATAC: interactive pipeline for the management and pre-processing of ATAC-seq samples

2. snakePipes: facilitating flexible, scalable and integrative epigenomic analysis

3. Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position

4. DEBrowser: interactive differential expression analysis and visualization tool for count data

Cited by 1 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. MMF-ATAC: A User-friendly Web Server for Multiple Motifs Finding on ATAC-seq Data;Proceedings of the 2024 4th International Conference on Bioinformatics and Intelligent Computing;2024-01-26

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