Efficient q-Gram Filters for Finding All ε-Matches over a Given Length-Reference-Cited by-同舟云学术

登录注册会员服务联系我们

Efficient q-Gram Filters for Finding All ε-Matches over a Given Length

Published:2006-03 Issue:2 Volume:13 Page:296-308
ISSN:1066-5277
Container-title:Journal of Computational Biology
language:en
Short-container-title:Journal of Computational Biology

Author:

Rasmussen Kim R.¹,Stoye Jens²,Myers Eugene W.³

Affiliation:

1. International NRW Graduate School in Bioinformatics and Genome Research, Center of Biotechnology, Universität Bielefeld, 33594 Bielefeld, Germany.

2. Technische Fakultät, Universität Bielefeld, 33594 Bielefeld, Germany.

3. Division of Computer Science, UC Berkeley, Berkeley, CA 94720-1776.

Publisher

Mary Ann Liebert Inc

Subject

Computational Theory and Mathematics,Computational Mathematics,Genetics,Molecular Biology,Modelling and Simulation

Link

http://www.liebertpub.com/doi/pdf/10.1089/cmb.2006.13.296

Reference14 articles.

1. Basic local alignment search tool

2. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

3. Sublinear approximate string matching and biological applications

4. Sparse dynamic programming I

Cited by 76 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. A framework for high-throughput sequence alignment using real processing-in-memory systems;Bioinformatics;2023-03-27

2. MTSv: rapid alignment-based taxonomic classification and high-confidence metagenomic analysis;PeerJ;2022-11-08

3. Global, highly specific and fast filtering of alignment seeds;BMC Bioinformatics;2022-06-10

4. Metagenomic analysis of coprolites from three Late Pleistocene megaherbivores from the Southwestern United States;2022-05-06

5. An FPGA based Energy-Efficient Read Mapper with Parallel Filtering and in-situ Verification;IEEE/ACM Transactions on Computational Biology and Bioinformatics;2021

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线，采集、加工和组织学术论文而形成的新型学术文献查询和分析系统，可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容，当前同舟云学术共收录了国内外主流学术期刊6万余种，收集的期刊论文及会议论文总量共计约1.5亿篇，并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询！咨询电话：010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号京ICP备18003416号-3