Information Extraction From Electronic Health Records to Predict Readmission Following Acute Myocardial Infarction: Does Natural Language Processing Using Clinical Notes Improve Prediction of Readmission?

Author:

Brown Jeremiah R.1,Ricket Iben M.1ORCID,Reeves Ruth M.23,Shah Rashmee U.4,Goodrich Christine A.1,Gobbel Glen2356,Stabler Meagan E.1,Perkins Amy M.35,Minter Freneka2ORCID,Cox Kevin C.1,Dorn Chad2ORCID,Denton Jason2,Bray Bruce E.67,Gouripeddi Ramkiran78ORCID,Higgins John1,Chapman Wendy W.9,MacKenzie Todd1,Matheny Michael E.2356

Affiliation:

1. Departments of Epidemiology and Biomedical Data Science Dartmouth Geisel School of Medicine Hanover NH

2. Department of Biomedical Informatics Vanderbilt University Medical Center Nashville TN

3. Geriatric Research Education and Clinical Care Center Tennessee Valley Healthcare System VA Nashville TN

4. Division of Cardiovascular Medicine University of Utah School of Medicine Salt Lake City UT

5. Department of Biostatistics Vanderbilt University Medical Center Nashville TN

6. Division of General Internal Medicine Vanderbilt University Medical Center Nashville TN

7. Department of Biomedical Informatics University of Utah School of Medicine Salt Lake City UT

8. Utah Clinical & Translational Science InstituteUniversity of Utah Salt Lake City UT

9. Centre for Digital Transformation of Health University of Melbourne Melbourne Victoria Australia

Abstract

Background Social risk factors influence rehospitalization rates yet are challenging to incorporate into prediction models. Integration of social risk factors using natural language processing (NLP) and machine learning could improve risk prediction of 30‐day readmission following an acute myocardial infarction. Methods and Results Patients were enrolled into derivation and validation cohorts. The derivation cohort included inpatient discharges from Vanderbilt University Medical Center between January 1, 2007, and December 31, 2016, with a primary diagnosis of acute myocardial infarction, who were discharged alive, and not transferred from another facility. The validation cohort included patients from Dartmouth‐Hitchcock Health Center between April 2, 2011, and December 31, 2016, meeting the same eligibility criteria described above. Data from both sites were linked to Centers for Medicare & Medicaid Services administrative data to supplement 30‐day hospital readmissions. Clinical notes from each cohort were extracted, and an NLP model was deployed, counting mentions of 7 social risk factors. Five machine learning models were run using clinical and NLP‐derived variables. Model discrimination and calibration were assessed, and receiver operating characteristic comparison analyses were performed. The 30‐day rehospitalization rates among the derivation (n=6165) and validation (n=4024) cohorts were 15.1% (n=934) and 10.2% (n=412), respectively. The derivation models demonstrated no statistical improvement in model performance with the addition of the selected NLP‐derived social risk factors. Conclusions Social risk factors extracted using NLP did not significantly improve 30‐day readmission prediction among hospitalized patients with acute myocardial infarction. Alternative methods are needed to capture social risk factors.

Publisher

Ovid Technologies (Wolters Kluwer Health)

Subject

Cardiology and Cardiovascular Medicine

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