Variation in Gene Expression Patterns in Human Gastric Cancers

Author:

Chen Xin12,Leung Suet Y.3,Yuen Siu T.3,Chu Kent-Man4,Ji Jiafu5,Li Rui1,Chan Annie S.Y.3,Law Simon4,Troyanskaya Olga G.6,Wong John4,So Samuel1,Botstein David6,Brown Patrick O.27

Affiliation:

1. Department of Surgery, Stanford University School of Medicine, Stanford, California 94305

2. Department of Biochemistry, Stanford University School of Medicine, Stanford, California 94305

3. Department of Pathology, The University of Hong Kong, Hong Kong, China

4. Department of Surgery, The University of Hong Kong, Hong Kong, China

5. Department of Surgery, Perking University School of Oncology, Beijing Cancer Hospital, Beijing, China

6. Department of Genetics, Stanford University School of Medicine, Stanford, California 94305

7. Department of Howard Hughes Medical Institute, Stanford University School of Medicine, Stanford, California 94305

Abstract

Gastric cancer is the world's second most common cause of cancer death. We analyzed gene expression patterns in 90 primary gastric cancers, 14 metastatic gastric cancers, and 22 nonneoplastic gastric tissues, using cDNA microarrays representing ∼30,300 genes. Gastric cancers were distinguished from nonneoplastic gastric tissues by characteristic differences in their gene expression patterns. We found a diversity of gene expression patterns in gastric cancer, reflecting variation in intrinsic properties of tumor and normal cells and variation in the cellular composition of these complex tissues. We identified several genes whose expression levels were significantly correlated with patient survival. The variations in gene expression patterns among cancers in different patients suggest differences in pathogenetic pathways and potential therapeutic strategies.

Publisher

American Society for Cell Biology (ASCB)

Subject

Cell Biology,Molecular Biology

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