Characterization and Genomic Analysis of ValSw3-3, a New Siphoviridae Bacteriophage Infecting Vibrio alginolyticus

Author:

Chen Ling1234,Liu Quan5,Fan Jiqiang1234,Yan Tingwei6,Zhang Haoran12,Yang Jinfang7,Deng Deng7,Liu Chaolan8,Wei Ting12,Ma Yingfei1234ORCID

Affiliation:

1. Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China

2. Key Laboratory of Quantitative Engineering Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China

3. Shenzhen Key Laboratory of Synthetic Genomics, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China

4. Guangdong Provincial Key Laboratory of Synthetic Genomics, Shenzhen, China

5. College of Life Science and Oceanography, Shenzhen University, Shenzhen, China

6. College of Life Science and Technology, Jinan University, Guangzhou, China

7. R&D Center, Shenzhen Alpha Feed Co., Ltd., Shenzhen, China

8. Antibiotics Research and Reevaluation Key Laboratory of Sichuan Province, Sichuan Industrial Institute of Antibiotics, Chengdu University, Chengdu, China

Abstract

Phage therapy has been considered a potential alternative to antibiotic therapy in treating bacterial infections. For controlling the vibriosis-causing pathogen Vibrio alginolyticus , well-documented phage candidates are still lacking. Here, we characterize a novel lytic Vibrio phage, ValSw3-3, based on its morphology, host range and infectivity, growth characteristics, stability under various conditions, and genomic features. Our results show that ValSw3-3 could be a potent candidate for phage therapy to treat V. alginolyticus infections due to its stronger infectivity and better pH and thermal stability than those of previously reported Vibrio phages. Moreover, genome sequence alignments, phylogenetic analysis, in silico proteomic comparison, and core gene analysis all support that this novel phage, ValSw3-3, and five unclassified phages form a clade distant from those of other known genera ratified by the ICTV. Thus, we propose a new viral genus within the Siphoviridae family to accommodate this clade, with ValSw3-3 as a representative member.

Funder

Ministry of Science and Technology of China

Guangdong Provincial Key Laborary of Synthetic Genomics

Shenzhen Key Laboratory of Synthetic Genomics

Shenzhen Peacock Team Project

Publisher

American Society for Microbiology

Subject

Virology,Insect Science,Immunology,Microbiology

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