Complete Genome Sequence of a Highly Pathogenic Avian Influenza Virus (H5N2) Associated with an Outbreak in Commercial Chickens, Iowa, USA, 2015

Author:

Clement Travis1,Kutish Gerald F.2,Nezworski Jill3,Scaria Joy1,Nelson Eric1,Christopher-Hennings Jane1,Diel Diego G.1

Affiliation:

1. Animal Disease Research and Diagnostic Laboratory (ADRDL), Department of Veterinary and Biomedical Sciences, South Dakota State University, Brookings, South Dakota, USA

2. Department of Pathobiology, University of Connecticut, Storrs, Connecticut, USA

3. Blue House Veterinary LLC, Hector, Minnesota, USA

Abstract

ABSTRACT A novel reassortant influenza A virus (H5N2) was first detected in British Columbia, Canada, in December 2014. The virus rapidly spread along the waterfowl migration flyways in the United States, causing multiple HPAI outbreaks in poultry. Here, we present the complete genome sequence of HPAIV-H5N2 from a commercial chicken flock in Iowa.

Publisher

American Society for Microbiology

Subject

Genetics,Molecular Biology

Reference5 articles.

1. Reassortant Highly Pathogenic Influenza A H5N2 Virus Containing Gene Segments Related to Eurasian H5N8 in British Columbia, Canada, 2014

2. Novel Eurasian Highly Pathogenic Avian Influenza A H5 Viruses in Wild Birds, Washington, USA, 2014

3. Outbreaks of avian influenza A (H5N2), (H5N8), and (H5N1) among birds—United States, December 2014-January 2015;Jhung MA;MMWR Morb Mortal Wkly Rep,2015

4. APHIS/USDA. 2015. Avian influenza disease. http://www.aphis.usda.gov/wps/portal/aphis/ourfocus/animalhealth/sa_animal_disease_information/sa_avian_health/ct_avian_influenza_disease.

5. CAP3: A DNA Sequence Assembly Program

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