Draft Genome Sequence of the Fish Pathogen Flavobacterium columnare Strain MS-FC-4-Reference-Cited by-同舟云学术

Draft Genome Sequence of the Fish Pathogen Flavobacterium columnare Strain MS-FC-4

Published:2018-05-17 Issue:20 Volume:6 Page:
ISSN:2169-8287
Container-title:Genome Announcements
language:en
Short-container-title:Genome Announc

Author:

Bartelme Ryan P.¹^ORCID,Barbier Paul²,Lipscomb Ryan S.³,LaPatra Scott E.⁴,Newton Ryan J.¹,Evenhuis Jason P.³,McBride Mark J.²^ORCID

Affiliation:

1. School of Freshwater Sciences, University of Wisconsin—Milwaukee, Milwaukee, Wisconsin, USA

2. Department of Biological Sciences, University of Wisconsin—Milwaukee, Milwaukee, Wisconsin, USA

3. U.S. Department of Agriculture, National Center for Cool and Cold Water Aquaculture, Agriculture Research Service, Kearneysville, West Virginia, USA

4. Clear Springs Foods, Inc., Buhl, Idaho, USA

Abstract

ABSTRACT Flavobacterium columnare MS-FC-4 is a highly virulent genetic group 1 (formerly genomovar I) strain isolated from rainbow trout ( Oncorhynchus mykiss ). The draft genome consists of three contigs totaling 3,449,277 bp with 2,811 predicted open reading frames. F. columnare MS-FC-4 is a model strain for functional genomic analyses.

Funder

U.S. Department of Agriculture

UW | Wisconsin Sea Grant Institute, University of Wisconsin

Publisher

American Society for Microbiology

Subject

Genetics,Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/genomeA.00429-18

Reference19 articles.

1. Columnaris disease in fish: a review with emphasis on bacterium-host interactions

2. Flavobacteria, a Never Ending Threat for Fish: a Review