Point-of-Care Cepheid Xpert HIV-1 Viral Load Test in Rural African Communities Is Feasible and Reliable

Author:

Moyo Sikhulile12ORCID,Mohammed Terence1,Wirth Kathleen E.34,Prague Melanie5,Bennett Kara6,Holme Molly Pretorius15,Mupfumi Lucy1,Sebogodi Philemon1,Moraka Natasha O.1,Boleo Corretah1,Maphorisa Comfort N.1,Seraise Boitumelo1,Gaseitsiwe Simani14,Musonda Rosemary M.14,van Widenfelt Erik14,Powis Kathleen M.147,Gaolathe Tendani1,Tchetgen Tchetgen Eric J.35,Makhema Joseph M.14,Essex Max14,Lockman Shahin148,Novitsky Vladimir14

Affiliation:

1. Botswana-Harvard AIDS Institute Partnership, Gaborone, Botswana

2. University of Stellenbosch, Division of Medical Virology, Faculty of Medicine & Health Sciences, Tygerberg, South Africa

3. Harvard T. H. Chan School of Public Health, Department of Epidemiology, Boston, Massachusetts, USA

4. Harvard T. H. Chan School of Public Health, Department of Immunology and Infectious Diseases, Boston, Massachusetts, USA

5. Harvard T. H. Chan School of Public Health, Department of Biostatistics, Boston, Massachusetts, USA

6. Bennett Statistical Consulting, Inc., Ballston Lake, New York, USA

7. Massachusetts General Hospital, Departments of Medicine and Pediatrics, Boston, Massachusetts, USA

8. Brigham and Women's Hospital, Division of Infectious Diseases, Boston, Massachusetts, USA

Abstract

ABSTRACT Routine monitoring of HIV-1 RNA or viral load (VL) in patients on antiretroviral therapy (ART) is important, but there are multiple impediments to VL testing in resource-constrained settings. An accurate point-of-care (POC) HIV-1 VL test could alleviate many of these challenges. We compared the performance of the Cepheid Xpert HIV-1 VL assay against the laboratory-based Abbott m 2000sp/ m 2000rt assay (Abbott assay). ART-naive individuals participating in the Botswana Combination Prevention Project in 20 communities provided EDTA-blood specimens during household surveys. Both the POC Xpert HIV-1 VL and Abbott assays were performed on specimens sampled from 277 individuals. We found a high correlation between the Xpert HIV-1 VL and Abbott assay results ( r 2 = 0.92; P < 0.001). The overall mean difference in the HIV-1 RNA values obtained by Xpert HIV-1 VL assay and Abbott assay was 0.34 log 10 copies/ml (95% confidence interval [CI], 0.26 to 0.40 log 10 copies/ml) ( P < 0.001). Using a clinically relevant level of 1,000 copies/ml as a threshold, agreement was 90.6% (95% CI, 87.9 to 93.1%), with a sensitivity of 98.6% (95% CI, 97.2 to 100%). The two methods agreed on their detectability of HIV-1 RNA (>40 copies/ml) at 97.1% (95% CI, 95.5 to 98.7%), with a sensitivity of 99.6% (95% CI, 97.2 to 100%). The POC Cepheid Xpert HIV-1 VL assay showed high agreement and accuracy with a laboratory-based method of HIV-1 RNA testing. The POC Xpert HIV-1 VL assay tended to overestimate HIV-1 VL, although the difference was below a clinically relevant threshold of 0.5 log 10 copies/ml. The POC Cepheid Xpert HIV-1 VL assay is a promising tool for monitoring patients on ART in southern Africa.

Funder

U.S. President's Emergency Plan for AIDS Relief

Wellcome Trust DELTAS Initiatives/Sub-Saharan Africa Network for TB/HIV Research Excellence

Publisher

American Society for Microbiology

Subject

Microbiology (medical)

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