The Fungal Tree of Life: From Molecular Systematics to Genome-Scale Phylogenies

Author:

Spatafora Joseph W.1,Aime M. Catherine2,Grigoriev Igor V.3,Martin Francis4,Stajich Jason E.5,Blackwell Meredith67

Affiliation:

1. Department of Botany and Plant Pathology; Oregon State University; Corvallis OR 97331

2. Department of Botany and Plant Pathology; Purdue University; West Lafayette IN 47907

3. U.S. Department of Energy Joint Genome Institute; Walnut Creek CA 94598

4. Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1136 Interactions Arbres/Microorganismes, Laboratoire d'Excellence Recherches Avancés sur la Biologie de l'Arbre et les Ecosystèmes Forestiers (ARBRE); Centre INRA-Lorraine; 54280 Champenoux France

5. Department of Plant Pathology and Microbiology and Institute for Integrative Genome Biology; University of California-Riverside; Riverside CA 92521

6. Department of Biological Sciences; Louisiana State University; Baton Rouge LA 70803

7. Department of Biological Sciences; University of South Carolina; Columbia SC 29208

Publisher

ASM Press

Reference209 articles.

1. Life with 6000 genes;Goffeau;Science,1996

2. Fueling the future with fungal genomics;Grigoriev;Mycology,2011

3. Quest for orthologs entails quest for tree of life: in search of the gene stream;Boeckmann;Genome Biol Evol,2015

4. OrthoMCL: identification of ortholog groups for eukaryotic genomes;Li;Genome Res,2003

5. Accelerated profile HMM searches;Eddy;PLOS Comput Biol,2011

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