Complete Genome Sequence of Campylobacter jejuni BSD5, a Multidrug-Resistant Isolate from a Poultry Processing Facility in the United States-Reference-Cited by-同舟云学术

Complete Genome Sequence of Campylobacter jejuni BSD5, a Multidrug-Resistant Isolate from a Poultry Processing Facility in the United States

Published:2023-06-20 Issue:6 Volume:12 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

He Yiping¹^ORCID,Reed Sue¹,Gunther Nereus W.¹,Armstrong Cheryl M.¹,Capobianco Joseph¹^ORCID

Affiliation:

1. Molecular Characterization of Foodborne Pathogens Research Unit, Eastern Regional Research Center, Agricultural Research Service (ARS), United States Department of Agriculture (USDA), Wyndmoor, Pennsylvania, USA

Abstract

Raw poultry can harbor microbial pathogens. Campylobacter jejuni BSD5, isolated from a critical control point within a poultry production plant, was sequenced. Genome annotation revealed several virulence genes including antibiotic resistance genes in agreement with the phenotypic results, indicating a potential risk of this strain to public health.

Funder

U.S. Department of Agriculture

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/mra.00284-23

Reference9 articles.

1. Centers for Disease Control and Prevention. 2020. Foodborne Diseases Active Surveillance Network (FoodNet). https://www.cdc.gov/foodnet/index.html.

2. Simultaneous Detection and Differentiation of Campylobacter jejuni, C. coli, and C. lari in Chickens Using a Multiplex Real-Time PCR Assay

3. Syme A Seemann T Gladman S Bulach D Chua X Gorse D Thang M. 2016. ABRPI training materials. PacBio reads: assembly with command line tools. http://sepsis-omics.github.io/tutorials/modules/cmdline_assembly/.

4. Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation

5. Circlator: automated circularization of genome assemblies using long sequencing reads