Dating the Cryptococcus gattii Dispersal to the North American Pacific Northwest

Author:

Roe Chandler C.1,Bowers Jolene1,Oltean Hanna2,DeBess Emilio3,Dufresne Philippe J.4,McBurney Scott5,Overy David P.56,Wanke Bodo7,Lysen Colleen8,Chiller Tom8,Meyer Wieland910,Thompson George R.11,Lockhart Shawn R.8,Hepp Crystal M.12,Engelthaler David M.1ORCID

Affiliation:

1. Translational Genomics Research Institute, Flagstaff, Arizona, USA

2. Washington State Department of Health, Shoreline, Washington, USA

3. Public Health Division, Oregon Health Authority, Salem, Oregon, USA

4. Laboratoire de Santé Publique du Québec, Institut National de Santé Publique du Québec, Charlottetown, Prince Edward Island, Canada

5. Canadian Wildlife Health Cooperative, Atlantic Veterinary College, University of Prince Edward Island, Charlottetown, Prince Edward Island, Canada

6. Agriculture and Agrifood Canada, Ottawa Research and Development Centre, Ottawa, Ontario, Canada

7. National Institute of Infectious Diseases Evandro Chagas, FIOCRUZ, Rio de Janeiro, Brazil

8. Mycotic Disease Branch, Centers for Disease Control and Prevention, Atlanta, Georgia, USA

9. Molecular Mycology Research Laboratory, Center for Infectious Diseases and Microbiology, Marie Bashir Institute for Emerging Infections and Biosecurity, Westmead Clinical School, Sydney Medical School, The University of Sydney, Westmead, New South Wales, Australia

10. Westmead Hospital, Westmead Institute for Medical Research, Westmead, New South Wales, Australia

11. University of California, Davis, Davis, California, USA

12. School of Informatics, Computing, and Cyber Systems, Northern Arizona University, Flagstaff, Arizona, USA

Abstract

The recent emergence of the pathogenic fungus Cryptococcus gattii in the Pacific Northwest (PNW) resulted in numerous investigations into the epidemiological and enzootic impacts, as well as multiple genomic explorations of the three primary molecular subtypes of the fungus that were discovered. These studies lead to the general conclusion that the subtypes identified likely emerged out of Brazil. Here, we conducted genomic dating analyses to determine the ages of the various lineages seen in the PNW and propose hypothetical causes for the dispersal events. Bayesian evolutionary analysis strongly suggests that these independent fungal populations in the PNW are all 60 to 100 years old, providing a timing that is subsequent to the opening of the Panama Canal, which allowed for more direct shipping between Brazil and the western North American coastline, a possible driving event for these fungal translocation events.

Funder

HHS | National Institutes of Health

HHS | Centers for Disease Control and Prevention

Publisher

American Society for Microbiology

Subject

Molecular Biology,Microbiology

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