Using deep learning to accelerate magnetic resonance measurements of molecular exchange

Author:

Cheng Zhaowei1ORCID,Hu Songtao2,Han Guangxu2,Fang Ke1ORCID,Jin Xinyu1,Ordinola Alfredo3ORCID,Özarslan Evren3ORCID,Bai Ruiliang245ORCID

Affiliation:

1. College of Information Science and Electronic Engineering, Zhejiang University 1 , Hangzhou, China

2. Key Laboratory of Biomedical Engineering of Education Ministry, College of Biomedical Engineering and Instrument Science, Zhejiang University 2 , Hangzhou, China

3. Department of Biomedical Engineering, Linköping University 3 , Linköping, Sweden

4. Interdisciplinary Institute of Neuroscience and Technology, School of Medicine, Zhejiang University 4 , Hangzhou, China

5. Liangzhu Laboratory, MOE Frontier Science Center for Brain Science and Brain-Machine Integration, State Key Laboratory of Brain-Machine Intelligence, Zhejiang University 5 , 1369 West Wenyi Road, Hangzhou 311121, China

Abstract

Real-time monitoring and quantitative measurement of molecular exchange between different microdomains are useful to characterize the local dynamics in porous media and biomedical applications of magnetic resonance. Diffusion exchange spectroscopy (DEXSY) is a noninvasive technique for such measurements. However, its application is largely limited by the involved long acquisition time and complex parameter estimation. In this study, we introduce a physics-guided deep neural network that accelerates DEXSY acquisition in a data-driven manner. The proposed method combines sampling pattern optimization and physical parameter estimation into a unified framework. Comprehensive simulations and experiments based on a two-site exchange system are conducted to demonstrate this new sampling optimization method in terms of accuracy, repeatability, and efficiency. This general framework can be adapted for other molecular exchange magnetic resonance measurements.

Funder

National Natural Science Foundation of China

National Science and Technology Major Project

Publisher

AIP Publishing

Subject

Physical and Theoretical Chemistry,General Physics and Astronomy

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