High-Quality Genome Resource of Xanthomonas hyacinthi Generated via Long-Read Sequencing

Author:

Cohen Stephen P.1,Luna Emily K.2,Lang Jillian M.2,Ziegle Janet3,Chang Christine3,Leach Jan E.2ORCID,Le-Saux Marion Fischer45,Portier Perrine45,Koebnik Ralf6,Jacobs Jonathan M.17ORCID

Affiliation:

1. Department of Plant Pathology, The Ohio State University, Columbus, OH 43210, U.S.A.

2. Department of Bioagricultural Sciences and Pest Management, Colorado State University, Fort Collins, CO 80523, U.S.A.

3. Pacific Biosciences, Menlo Park, CA 94025, U.S.A.

4. IRHS, Institut National de la Recherche Agronomique (INRA), Université d’Angers, Agrocampus-Ouest, SFR 4207 QuaSav, 49071, Beaucouzé, France

5. CIRM-CFBP French Collection for Plant-associated Bacteria, IRHS, UMR 1345, INRA-ACO-UA, 42 rue Georges Morel, 49070, Beaucouzé, France

6. Institut de Recherche pour le Développement (IRD), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (CIRAD), Université Montpellier, IPME, 34000 Montpellier, France

7. Infectious Disease Institute, The Ohio State University, Columbus, OH 43210, U.S.A.

Abstract

The bacterial plant pathogen Xanthomonas hyacinthi is the causal agent of yellow disease of Hyacinthus and other ornamental plant genera. There is no available complete genome for X. hyacinthi, limiting basic research for this pathogen. Here, we release a high-quality complete genome sequence for the X. hyacinthi type strain, CFBP 1156. Single-molecule real-time (SMRT) sequencing with a mean coverage of 306× revealed two contigs of 4,918,645 and 44,381 bp in size. This was the first characterized plant-disease-causing species of Xanthomonas and this genome provides a resource to better understand the biology of yellow disease of hyacinth.

Funder

National Institute of Food and Agriculture

Publisher

Scientific Societies

Subject

Plant Science,Agronomy and Crop Science

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