Comparing SNP panels and statistical methods for estimating genomic breed composition of individual animals in ten cattle breeds

Author:

He Jun,Guo Yage,Xu Jiaqi,Li Hao,Fuller Anna,Tait Richard G.,Wu Xiao-LinORCID,Bauck Stewart

Publisher

Springer Science and Business Media LLC

Subject

Genetics(clinical),Genetics

Reference32 articles.

1. Funkhouser SA, Bates RO, Catherine W. Ernst, Doug Newcom Juan Pedro Steibel. Estimation of genome-wide and locus-specific breed composition in pigs. Transl. Anim Sci. 2017;1:36–44.

2. Pickrell JK, Pritchard JK. Inference of population splits and mixtures from genome-wide allele frequency data. PLoS Genet. 2012;8:e1002967.

3. Akanno EC, Chen L, Abo-Ismail MK, Crowley JJ, Wang Z, Li C, Basarab JA, MacNeil MD, Plastow G. Genomic prediction of breed composition and heterosis effects in Angus, Charolais, and Hereford crosses using 50K genotypes. Canadian J Anim Sci. 2017;97:431–8.

4. Cardon LR, Palmer LJ. Population stratification and spurious allelic association. Lancet. 2003;361:598–604.

5. Marchini J, Cardon LR, Phillips MS, Donnelly P. The effects of human population structure on large genetic association studies. Nat Genet. 2004;36:512–7.

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