Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis-Reference-Cited by-同舟云学术

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Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis

Published:2010-11-30 Issue:1 Volume:11 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Du Pan,Zhang Xiao,Huang Chiang-Ching,Jafari Nadereh,Kibbe Warren A,Hou Lifang,Lin Simon M

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

http://link.springer.com/content/pdf/10.1186/1471-2105-11-587.pdf

Reference24 articles.

1. Laird PW: Principles and challenges of genome-wide DNA methylation analysis. Nat Rev Genet 2010, 11(3):191–203. 10.1038/nrg2732

2. Esteller M: CpG island hypermethylation and tumor suppressor genes: a booming present, a brighter future. Oncogene 2002, 21(35):5427–5440. 10.1038/sj.onc.1205600

3. Herman JG, Baylin SB: Gene silencing in cancer in association with promoter hypermethylation. N Engl J Med 2003, 349(21):2042–2054. 10.1056/NEJMra023075

4. Shen L, Kondo Y, Guo Y, Zhang J, Zhang L, Ahmed S, Shu J, Chen X, Waterland RA, Issa JP: Genome-wide profiling of DNA methylation reveals a class of normally methylated CpG island promoters. PLoS Genet 2007, 3(10):2023–2036. 10.1371/journal.pgen.0030181

5. O'Riain C, O'Shea DM, Yang Y, Le Dieu R, Gribben JG, Summers K, Yeboah-Afari J, Bhaw-Rosun L, Fleischmann C, Mein CA, et al.: Array-based DNA methylation profiling in follicular lymphoma. Leukemia 2009, 23(10):1858–1866. 10.1038/leu.2009.114

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