Optical and physical mapping with local finishing enables megabase-scale resolution of agronomically important regions in the wheat genome-Reference-Cited by-同舟云学术

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Optical and physical mapping with local finishing enables megabase-scale resolution of agronomically important regions in the wheat genome

Published:2018-08-17 Issue:1 Volume:19 Page:
ISSN:1474-760X
Container-title:Genome Biology
language:en
Short-container-title:Genome Biol

Author:

Keeble-Gagnère Gabriel,Rigault Philippe,Tibbits Josquin,Pasam Raj,Hayden Matthew,Forrest Kerrie,Frenkel Zeev,Korol Abraham,Huang B. Emma,Cavanagh Colin,Taylor Jen,Abrouk Michael,Sharpe Andrew,Konkin David,Sourdille Pierre,Darrier Benoît,Choulet Frédéric,Bernard Aurélien,Rochfort Simone,Dimech Adam,Watson-Haigh Nathan,Baumann Ute,Eckermann Paul,Fleury Delphine,Juhasz Angela,Boisvert Sébastien,Nolin Marc-Alexandre,Doležel Jaroslav,Šimková Hana,Toegelová Helena,Šafář Jan,Luo Ming-Cheng,Câmara Francisco,Pfeifer Matthias,Isdale Don,Nyström-Persson Johan,IWGSC ,Koo Dal-Hoe,Tinning Matthew,Cui Dangqun,Ru Zhengang,Appels Rudi^ORCID

Funder

Grains Research and Development Corporation

Department of Industry, Innovation, Science, Research and Tertiary Education, Australian Government

Commonwealth Scientific and Industrial Research Organisation

BioPlatform Australia

Victorian Department of Economic Development, Jobs, Transport and Resources

National Science Foundation

INB

Czech Ministry of Education Youth and Sports

Publisher

Springer Science and Business Media LLC

Link

http://link.springer.com/content/pdf/10.1186/s13059-018-1475-4.pdf

Reference48 articles.

1. The International Wheat Genome Sequencing Conosrtium. Shifting the limits in wheat research and breeding through a fully annotated and anchored reference genome sequence. Science. 2018. https://doi.org/10.1126/science.aar7191 .

2. The International Wheat Genome Sequencing Consortium. A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome. Science. 2014;345:1251788.

3. Clavijo BP, Kettleborough G, Heavens D, Chapman H, Lipscombe J, Barker T, Lu F-H, McKenzie N, Raats D, Ramirez-Gonzalez RH, Coince A, Peel N, Percival-Alwyn L, Duncan O, Trösch J, Yu G, Bolser DM, Namaati G, Kerhornou A, Spannagl M, Gundlach H, Haberer G, Davey RP, Fosker C, Di Palma FD, Phillips AL, Millar AH, Kersey PJ, Uauy C, Krasileva KW, Swarbreck D, Bevan MW, Clark MD. An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations. Genome Res. 2017;27:885–96.

4. Zimin AV, Puiu D, Hall R, Kingan S, Salzberg SL (2017), The first near-complete assembly of the hexaploid bread wheat genome, Triticum aestivum. GigaScience;6:1–7.

5. Eversole K, Rogers J, Keller B, Appels R, Feuillet C. Sequencing and assembly of the wheat genome. In: Achieving sustainable cultivation of wheat, Part 1, Chap. 2. Cambridge: Burleigh-Dodds Science Publishing; 2017. https://doi.org/10.19103/AS.2016.0004.04 .

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