Global phylogeography and ancient evolution of the widespread human gut virus crAssphage-Reference-Cited by-同舟云学术

Global phylogeography and ancient evolution of the widespread human gut virus crAssphage

Published:2019-07-08 Issue:10 Volume:4 Page:1727-1736
ISSN:2058-5276
Container-title:Nature Microbiology
language:en
Short-container-title:Nat Microbiol

Author:

Edwards Robert A.^ORCID,Vega Alejandro A.^ORCID,Norman Holly M.,Ohaeri Maria,Levi Kyle,Dinsdale Elizabeth A.,Cinek Ondrej^ORCID,Aziz Ramy K.^ORCID,McNair Katelyn,Barr Jeremy J.^ORCID,Bibby Kyle^ORCID,Brouns Stan J. J.,Cazares Adrian,de Jonge Patrick A.,Desnues Christelle,Díaz Muñoz Samuel L.,Fineran Peter C.^ORCID,Kurilshikov Alexander^ORCID,Lavigne Rob^ORCID,Mazankova Karla^ORCID,McCarthy David T.,Nobrega Franklin L.,Reyes Muñoz Alejandro^ORCID,Tapia German,Trefault Nicole,Tyakht Alexander V.,Vinuesa Pablo,Wagemans Jeroen,Zhernakova Alexandra^ORCID,Aarestrup Frank M.^ORCID,Ahmadov Gunduz,Alassaf Abeer,Anton Josefa,Asangba Abigail^ORCID,Billings Emma K.,Cantu Vito Adrian,Carlton Jane M.,Cazares Daniel,Cho Gyu-Sung,Condeff Tess,Cortés Pilar^ORCID,Cranfield Mike,Cuevas Daniel A.^ORCID,De la Iglesia Rodrigo,Decewicz Przemyslaw^ORCID,Doane Michael P.^ORCID,Dominy Nathaniel J.^ORCID,Dziewit Lukasz^ORCID,Elwasila Bashir Mukhtar,Eren A. Murat^ORCID,Franz Charles,Fu Jingyuan^ORCID,Garcia-Aljaro Cristina,Ghedin Elodie^ORCID,Gulino Kristen M.,Haggerty John M.,Head Steven R.,Hendriksen Rene S.,Hill Colin,Hyöty Heikki,Ilina Elena N.,Irwin Mitchell T.,Jeffries Thomas C.,Jofre Juan,Junge Randall E.,Kelley Scott T.,Khan Mirzaei Mohammadali,Kowalewski Martin,Kumaresan Deepak,Leigh Steven R.,Lipson David,Lisitsyna Eugenia S.^ORCID,Llagostera Montserrat,Maritz Julia M.^ORCID,Marr Linsey C.^ORCID,McCann Angela,Molshanski-Mor Shahar,Monteiro Silvia,Moreira-Grez Benjamin^ORCID,Morris Megan,Mugisha Lawrence^ORCID,Muniesa Maite^ORCID,Neve Horst^ORCID,Nguyen Nam-phuong,Nigro Olivia D.^ORCID,Nilsson Anders S.^ORCID,O’Connell Taylor,Odeh Rasha,Oliver Andrew,Piuri Mariana,Prussin II Aaron J.,Qimron Udi,Quan Zhe-Xue,Rainetova Petra,Ramírez-Rojas Adán,Raya Raul,Reasor Kim,Rice Gillian A. O.,Rossi Alessandro^ORCID,Santos Ricardo^ORCID,Shimashita John,Stachler Elyse N.,Stene Lars C.,Strain Ronan,Stumpf Rebecca,Torres Pedro J.,Twaddle Alan,Ugochi Ibekwe MaryAnn,Villagra Nicolás,Wandro Stephen,White Bryan,Whiteley Andy,Whiteson Katrine L.,Wijmenga Cisca^ORCID,Zambrano Maria M.,Zschach Henrike,Dutilh Bas E.^ORCID

Publisher

Springer Science and Business Media LLC

Subject

Cell Biology,Microbiology (medical),Genetics,Applied Microbiology and Biotechnology,Immunology,Microbiology

Link

http://www.nature.com/articles/s41564-019-0494-6.pdf

Reference81 articles.

1. Sender, R., Fuchs, S. & Milo, R. Are we really vastly outnumbered? Revisiting the ratio of bacterial to host cells in humans. Cell 164, 337–340 (2016).

2. Nguyen, S. et al. Bacteriophage transcytosis provides a mechanism to cross epithelial cell layers. mBio 8, e01874–17 (2017).

3. Reyes, A. et al. Viruses in the faecal microbiota of monozygotic twins and their mothers. Nature 466, 334–338 (2010).

4. Minot, S. et al. The human gut virome: inter-individual variation and dynamic response to diet. Genome Res. 21, 1616–1625 (2011).

5. Reyes, A., Semenkovich, N. P., Whiteson, K., Rohwer, F. & Gordon, J. I. Going viral: next-generation sequencing applied to phage populations in the human gut. Nat. Rev. Microbiol. 10, 607–617 (2012).

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