Author:
Zakem Emily J.,Polz Martin F.,Follows Michael J.
Abstract
Abstract
Microbial activity mediates the fluxes of greenhouse gases. However, in the global models of the marine and terrestrial biospheres used for climate change projections, typically only photosynthetic microbial activity is resolved mechanistically. To move forward, we argue that global biogeochemical models need a theoretically grounded framework with which to constrain parameterizations of diverse microbial metabolisms. Here, we explain how the key redox chemistry underlying metabolisms provides a path towards this goal. Using this first-principles approach, the presence or absence of metabolic functional types emerges dynamically from ecological interactions, expanding model applicability to unobserved environments.
“Nothing is less real than realism. It is only by selection, by elimination, by emphasis, that we get at the real meaning of things.” –Georgia O’Keefe
Publisher
Springer Science and Business Media LLC
Subject
General Physics and Astronomy,General Biochemistry, Genetics and Molecular Biology,General Chemistry
Reference109 articles.
1. Falkowski, P. G., Fenchel, T. & Delong, E. F. The microbial engines that drive Earth’s biogeochemical cycles. Science 320, 1034–1039 (2008). In this review, the authors emphasize how thermodynamically constrained, microbially catalyzed redox reactions, which correspond to a set of evolutionarily persistent genes, drive major global biogeochemical fluxes.
2. Heimann, M. & Reichstein, M. Terrestrial ecosystem carbon dynamics and climate feedbacks. Nature 451, 289–292 (2008).
3. Matsumoto, K., Hashioka, T. & Yamanaka, Y. Effect of temperature-dependent organic carbon decay on atmospheric pCO2. J. Geophys. Res. 112, G02007 (2007).
4. Volk, T. & Hoffert, M. I. In The carbon cycle and atmospheric CO2: natural variations Archean to present. Chapman conference papers, 1984 (eds. Sundquist, E. T. & Broecker, W. S.) 99–110 (American Geophysical Union, 1985).
5. Oschlies, A., Brandt, P., Stramma, L. & Schmidtko, S. Drivers and mechanisms of ocean deoxygenation. Nat. Geosci. 11, 467–473 (2018).
Cited by
28 articles.
订阅此论文施引文献
订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献