BioPipeline Creator—a user-friendly Java-based GUI for managing and customizing biological data pipelines-Reference-Cited by-同舟云学术

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BioPipeline Creator—a user-friendly Java-based GUI for managing and customizing biological data pipelines

Published:2024-07-17 Issue:1 Volume:14 Page:
ISSN:2045-2322
Container-title:Scientific Reports
language:en
Short-container-title:Sci Rep

Author:

Maia Cordeiro Cléo,da Silva Moia Gislenne,de Oliveira Mônica Silva,da Silva e Silva Lucas,da Cruz Schneider Maria Paula,Costa Sávio S.,Baraúna Rafael Azevedo,das Graças Diego Assis,Silva Artur,de Oliveira Veras Adonney Allan

Publisher

Springer Science and Business Media LLC

Link

https://www.nature.com/articles/s41598-024-67409-8.pdf

Reference14 articles.

1. Iqbal, M. N. et al. BMT: Bioinformatics mini toolbox for comprehensive DNA and protein analysis. Genomics 112, 4561–4566. https://doi.org/10.1016/j.ygeno.2020.08.010 (2020).

2. McKenna, A. et al. The Genome Analysis Toolkit: A mapreduce framework for analyzing next-generation DNA sequencing data. Genome Res. 20, 1297–1303. https://doi.org/10.1101/gr.107524.110 (2010).

3. The ENCODE Project Consortium. An integrated encyclopedia of DNA elements in the human genome. Nature 489, 57–74. https://doi.org/10.1038/nature11247 (2012).

4. Caporaso, J. G. et al. QIIME allows analysis of high-throughput community sequencing data. Nat. Methods 7, 335–336. https://doi.org/10.1038/nmeth.f.303 (2010).

5. Goecks, J. et al. Galaxy: A comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences. Genome Biol. 11, R86. https://doi.org/10.1186/gb-2010-11-8-r86 (2010).

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