Enhanced analysis of tabular data through Multi-representation DeepInsight

Author:

Sharma Alok,López Yosvany,Jia Shangru,Lysenko Artem,Boroevich Keith A.,Tsunoda Tatsuhiko

Abstract

AbstractTabular data analysis is a critical task in various domains, enabling us to uncover valuable insights from structured datasets. While traditional machine learning methods can be used for feature engineering and dimensionality reduction, they often struggle to capture the intricate relationships and dependencies within real-world datasets. In this paper, we present Multi-representation DeepInsight (MRep-DeepInsight), a novel extension of the DeepInsight method designed to enhance the analysis of tabular data. By generating multiple representations of samples using diverse feature extraction techniques, our approach is able to capture a broader range of features and reveal deeper insights. We demonstrate the effectiveness of MRep-DeepInsight on single-cell datasets, Alzheimer's data, and artificial data, showcasing an improved accuracy over the original DeepInsight approach and machine learning methods like random forest, XGBoost, LightGBM, FT-Transformer and L2-regularized logistic regression. Our results highlight the value of incorporating multiple representations for robust and accurate tabular data analysis. By leveraging the power of diverse representations, MRep-DeepInsight offers a promising new avenue for advancing decision-making and scientific discovery across a wide range of fields.

Funder

Japan Society for the Promotion of Science

Core Research for Evolutional Science and Technology

Publisher

Springer Science and Business Media LLC

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