Parallel reaction monitoring revealed tolerance to drought proteins in weedy rice (Oryza sativa f. spontanea)

Author:

Han Bing,Ma Xiaoding,Cui Di,Geng Leiyue,Cao Guilan,Zhang Hui,Han Longzhi

Abstract

AbstractDrought is a complicated abiotic stress factor with severe effects on rice growth and production. Weedy rice is a valuable genetic resource that possesses a strong capacity for drought tolerance, cold tolerance, and salt tolerance, and is an excellent material for studying rice tolerance. Here, according to comprehensive tolerance to drought index D, accession WR16 was selected based on strong drought tolerance among 133 studied weedy red rice germplasms. WR16 was compared with Oryza sativa ssp. Japonica. cv. IAPAR-9, a reference genotype originating from Brazil. In addition, accession WR24 was classified as moderately tolerant to drought accessions. Transcriptomic and proteomic analyses were combined to identify 38 co-upregulated proteins related to drought tolerance, and targeted parallel reaction monitoring (PRM) was used to precisely quantify and verify nine proteins in the complex backgrounds. Result showed that six proteins were significantly (Fisher's exact P value < 0.05) related to drought tolerance in accessions WR16 and WR24. Among them, OS09T0478300-01, OS09T0530300-01, and OS01T0800500-01 formed a combined defense system to respond to drought stress in weedy rice. Results of these studies provide comprehensive information for precisely identifying and verifying tolerance to drought proteins and lay a solid theoretical foundation for research on drought tolerance mechanisms.

Funder

the National Key Research and Development Program of China

the National Natural Science Foundation of China

the National Science and Technology Support Program of China

CAAS Science and Technology Innovation Program

National Infrastructure for Crop Germplasm Resources

Protective Program of Crop Germplasm of China

Publisher

Springer Science and Business Media LLC

Subject

Multidisciplinary

Reference43 articles.

1. Gao, Q., Ma, D. R., Kong, D. X., Xu, Z. J. & Chen, W. F. Photosynthetic and water physiological characteristics of weedy rice in northern China. J. Appl. Eco. 24(11), 3131–3136 (2013) (Chinese Abstract).

2. Chai, C. L., Shankar, R., Jain, M. & Subudhi, P. K. Genome-wide discovery of DNA polymorphisms by whole genome sequencing differentiates weedy and cultivated rice. Sci. Rep. 8, 14218 (2018).

3. Han, B. et al. Identification of quantitative traitloci associated with drought tolerance traits in rice (Oryza sativa L.) under PEG and field drought stress. Euphytica 214, 74 (2018).

4. Aebersold, R. & Mann, M. Mass spectrometry-based proteomics. Nature 422, 198–207 (2003).

5. Li, X. J. et al. Ablood-based proteomic classifier for the molecular characterization of pulmonary nodules. Sci. Transl. Med. 5(207), ra142 (2013).

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