Submillisecond Atomistic Molecular Dynamics Simulations Reveal Hydrogen Bond-Driven Diffusion of a Guest Peptide in Protein

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Submillisecond Atomistic Molecular Dynamics Simulations Reveal Hydrogen Bond-Driven Diffusion of a Guest Peptide in Protein–RNA Condensate

Published:2024-02-28 Issue:10 Volume:128 Page:2347-2359
ISSN:1520-6106
Container-title:The Journal of Physical Chemistry B
language:en
Short-container-title:J. Phys. Chem. B

Author:

Unarta Ilona C.¹²,Cao Siqin¹²^ORCID,Goonetilleke Eshani C.¹²,Niu Jiani¹^ORCID,Gellman Samuel H.¹^ORCID,Huang Xuhui¹²^ORCID

Affiliation:

1. Department of Chemistry, University of Wisconsin─Madison, Madison, Wisconsin 53706, United States

2. Theoretical Chemistry Institute, University of Wisconsin─Madison, Madison, Wisconsin 53706, United States

Funder

Wisconsin Alumni Research Foundation

Croucher Foundation

University of Wisconsin-Madison

National Institute of General Medical Sciences

Publisher

American Chemical Society (ACS)

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.jpcb.3c08126

Reference55 articles.

1. RGG/RG Motif Regions in RNA Binding and Phase Separation

2. Spontaneous driving forces give rise to protein−RNA condensates with coexisting phases and complex material properties

3. Evaluating phase separation in live cells: diagnosis, caveats, and functional consequences

4. Liquid-liquid phase separation: Orchestrating cell signaling through time and space

5. A framework for understanding the functions of biomolecular condensates across scales

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