Sensitivity of the RNA Structure to Ion Conditions as Probed by Molecular Dynamics Simulations of Common Canonical RNA Duplexes-Reference-Cited by-同舟云学术

Sensitivity of the RNA Structure to Ion Conditions as Probed by Molecular Dynamics Simulations of Common Canonical RNA Duplexes

Published:2023-03-29 Issue:7 Volume:63 Page:2133-2146
ISSN:1549-9596
Container-title:Journal of Chemical Information and Modeling
language:en
Short-container-title:J. Chem. Inf. Model.

Author:

Kührová Petra¹²^ORCID,Mlýnský Vojtěch²^ORCID,Otyepka Michal¹³^ORCID,Šponer Jiří¹²^ORCID,Banáš Pavel¹^ORCID

Affiliation:

1. Regional Centre of Advanced Technologies and Materials, Czech Advanced Technology and Research Institute (CATRIN), Palacký University Olomouc, Šlechtitelů 27, 779 00 Olomouc, Czech Republic

2. Institute of Biophysics of the Czech Academy of Sciences, Královopolská 135, 612 00 Brno, Czech Republic

3. IT4Innovations, VSB − Technical University of Ostrava, 17. listopadu 2172/15, 708 00 Ostrava, Poruba, Czech Republic

Funder

European Regional Development Fund

Ministerstvo ?kolstv?, Ml?de?e a Telov?chovy

Grantov? Agentura Cesk? Republiky

Publisher

American Chemical Society (ACS)

Subject

Library and Information Sciences,Computer Science Applications,General Chemical Engineering,General Chemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.2c01438

Reference98 articles.

1. Folding of RNA tertiary structure: Linkages between backbone phosphates, ions, and water

2. Metal ions and RNA folding: a highly charged topic with a dynamic future

3. The linkage between magnesium binding and RNA folding 1 1Edited by B. Honig

4. Controlling ribozyme activity by metal ions

5. The Crystal Structures of Metal Complexes of Nucleic Acids and Their Constituent

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